Gene Rpal_5220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_5220 
Symbol 
ID6412920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp5631680 
End bp5632060 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content64% 
IMG OID642715110 
Productresponse regulator receiver protein 
Protein accessionYP_001994183 
Protein GI192293578 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.472283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCA TCCTGATCGC CGACGACGAA GAATCGATGC GCCTGCTGGT CGCACGCGCG 
ATCGGCATGG ACGGCCACGA GACCGTGACG GCCGAAGACG GCAGCGAAGC GCTGGAAATT
CTCACCAGCC AAAACGGCAA GTTCGACCTG CTGCTGACCG ACATCAAGAT GCCGATCATG
GACGGCATCG CGCTGGCGCT CGCCGCGGCA CGCGACTTCC CGGACCTGAC GATCCTGTTG
ATGACCGGCT TCGCCGATCA GCGCGAACGC GCCTTCGGCC TCGACGCCAT CGTGCACGAC
GTCGTCACCA AGCCCTTCTC GGTCGCCGAC ATCCGCACTG CAGTTACGGA TGCACTGACG
GCGAAGAAGA GTAGTAGCTG A
 
Protein sequence
MARILIADDE ESMRLLVARA IGMDGHETVT AEDGSEALEI LTSQNGKFDL LLTDIKMPIM 
DGIALALAAA RDFPDLTILL MTGFADQRER AFGLDAIVHD VVTKPFSVAD IRTAVTDALT
AKKSSS