Gene NATL1_20711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20711 
Symbol 
ID4780188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1715525 
End bp1716265 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID640085367 
Producttwo-component response regulator 
Protein accessionYP_001015891 
Protein GI124026776 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTGCA TTTTGGTTGT AGATGATGAA CCAGCAGTAT TGAAAGTCTT GGTAACGAGG 
CTAAATCTTG CTGGTTATCA AGTTTTATCT GCACAGGATG GAGAGCAAGC ACTAGAGGTT
TTTCACAAAG AAGCTCCAGA CTTAGTGGTT CTAGATGTCA TGCTCCCTAA GATGGATGGC
TTTGCAGTTT GTCGAAGAAT TAGAGCTGAG TCTTGCGTTC CAATAATATT CTTGACTGCT
CTTGAAGCGA TTTCAGAAAG AGTAGCAGGT TTGGATTTAG GCGCTGATGA TTACCTGGCT
AAACCATTTA GCCCCAAGGA GTTAGAAGCT AGAATAGCGA CGATTTTGAG ACGAGTGGGA
CCTGCTCCAA CTATTGATGA ACCAAGAGAA GTCCCGTCAG GTCAAGGAGT AATGAAGCTT
GGTGATCTTG TTGTAGACAC CAATAGAAGG CAAGTCAGTA GAGGAGGAGA AAGGATAGGC
TTAACATATA CAGAATTTAG CTTGCTGGAA TTATTATTTC GTGATCCTGG CCGTGTTGTA
CCTCGAGCAG AAATTCTGGA ACAGCTTTGG GGTTATCCTC CAAGAAGAGC GGCGGATTTA
AGAGTTGTAG ATGTCTACGT AGCTCGTTTA AGAGGGAAGC TTGAACCAGA TCCTAGGAAT
CCTGAGTTGA TTTTGACTGT CAGAGGTATT GGCTACGCTT CTCAAAGAAT TGGAGAATTT
CCTACTGCTA TTGCCAGTTA A
 
Protein sequence
MTCILVVDDE PAVLKVLVTR LNLAGYQVLS AQDGEQALEV FHKEAPDLVV LDVMLPKMDG 
FAVCRRIRAE SCVPIIFLTA LEAISERVAG LDLGADDYLA KPFSPKELEA RIATILRRVG
PAPTIDEPRE VPSGQGVMKL GDLVVDTNRR QVSRGGERIG LTYTEFSLLE LLFRDPGRVV
PRAEILEQLW GYPPRRAADL RVVDVYVARL RGKLEPDPRN PELILTVRGI GYASQRIGEF
PTAIAS