Gene Dbac_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDbac_0831 
Symbol 
ID8376486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfomicrobium baculatum DSM 4028 
KingdomBacteria 
Replicon accessionNC_013173 
Strand
Start bp902635 
End bp905508 
Gene Length2874 bp 
Protein Length957 aa 
Translation table11 
GC content62% 
IMG OID645000070 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_003157365 
Protein GI256828637 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCTC CCATCGGCAT ATTCACGTCC TCGCCCGAAG GCCGCTACCT GTCCGCGAAT 
CCGGCCATGG CCCGGATTTT TGGCTATGCG TCGCCCCAGG CCTTGGTCGC TGCATCCGCA
GAGGTTGGAA CGGGCAGCCA TGCCGATTCT GCCGAGGGGG GCGCGTTCCT GCGGCTTCTG
GACGTTCAGG ACGAAATTTT CGACCGGGAA ACCCGTCATC TGCGCCGGGA CGGTTCCGAG
GTCTGGGTGT CCACCAGCGC GCGGGCCGTG CGCGACAGCT CCGGAAAAAC GCTGCATTTT
TTGGGTTTCG TCACGGAGAT CACGCCCCGC AAGCAGGTCG AGGCGGTCCT GGCCCACGAA
CGGAACCTGT ACCGCGATCT TGTCGCCTCG CAGCCTGCCG GAGTGTACAG GTTGCGCGTT
TTGGCCCAAA AGCCATGGGG CCCGGAAGAG TGGGTTGAAA AGCTGGAATC CAACTACACG
CTTGAAATGG TCAGCGACCG GTTCTGCGAA ATCCTGGGCG CGACCCGGGA AGAGTGCCAA
GCTAACGCGA GTATCGTGAT CGAGCGCATG CATTCCGAGG ACAGGGCGGA TTTCGTGGCC
AGGAACGTTC TGGCCGTGGA GTCGCTGTCG CGCTTCACCT GGGAGGGACG GATCGAGAGC
GCCGATGGGG ATCGCTGGGT CCACTTCGAA TCCGTGCCCA GGTCCCTGGA CAACGGGGAT
GTGCTCTGGA CCGGCATTCT GCTGGACATC TCCGGGTTCA AGCAGGCCGA GCGGGCATCG
GACCAGAGGG CCCGTGAGCT GGCCGCTCTG CATGAGTTGA GCATGGTCGT CAGTTCCTCG
CTGTCCCTGG ACCAGATCGT GGCAGCCTCG GTGCGCGTGG TCCGGGAGAC CACGGGTTCC
GACATGGTCT ATCTGTTCCT CCGGCAGGGA GAGCGTCTGC TGCTTCAGGC AGTGTGTCCG
CAGGATTCGG AAATGTTGCT GCATGAAGTT CATGAACACC GGGTCGGGGA GTGCTTGTGC
GGGCTGGCGG TGCTGGACGG CGAGCCGCAG TACTCCAACG ACATTCTCAG CGATGACCGC
TGCACCAGGC AGGAATGCAA GGAGGCCGGT ATCCTGTCCT TCGCGGCGCT GCCGCTTCGC
GACGGCCGGG ATGTCATCGG CGTCATGGGA CTGGCTTCCC GCACGCCCAG GGATTTTCAT
CCCCAGTCCG AATTTCTGGA GACCCAAGCC CATCAGGTGT CTATCGCCCT GGTCAATGCG
CGCCTCTATG AGAAGGCCAA CCAGGAGCTG GACAACCGCA TCCAGGCCGA AAAGACCTTG
CGAGAGCGTG AGGAATTCAT CCGCACCGTG CTGGACAATC TGCCCGTAGG CGTGGCCGTG
AACACGGTTT CTCCGGACGT CAGGTTCGAG TACATGAATG AGCTCTTCCC CAGGTTTTAC
GGAACGACCA GGGAGTCTAT CACCGCCCCC GAGGGATTCT GGGAGGCCGC GTATCCCGAA
CCGGAATTCC GGGGAAAGAT TCGCGGGATG GTCACGGCAG GCTGCGCCAG CGGGAGCCAG
GAGCGCATGT GCTGGGCTGA TGTGCCCATC ATGCGGCAGG ACGAGACCCG CTTCGTCACC
GCCCGCAACA TCCCGCTGCC GGGCACGAAC CTGATGATTT CGACGGTCTG GGACGTGACC
GAACGTAAGC AGGCGGAGCA GGCCATGGCC AGGGCCAAGG ATGCGGCCGA GTCCGCCAGC
CAGGCTAAAA ACGAATTCCT GGCCAACATG AGCCATGAGC TGCGTACCCC CTTGAACGGC
GTCATGGCCA TGATGCAGCT CTTGGAGATG ACGCCTTTGA ACGGCGAGCA GACGGAGTAC
GTGCATCTGG CCAGAAAGTC GTCCGAGCGG CTGACTCGCC TGCTGAGCGA TCTGCTGGAC
ATCTCGCGTA TCGAGGCCGG CAAGGTCGAG ATACGCGAGG AGGCGTTTGC GGTTCAGGAG
CTGCTCCAGT CCGTTTCCGA ACTGTTCAAC ACCAGCGCGC AGAGCAAGGG CGTGTCTCTG
GAGCTGTCGA CGGATCCTTC CGTGCCGCCC AGGCTCAAGG GTGACGCGGC CAGGCTCAGG
CAGGTGCTTT TCAACCTGGT GGGGAACGCC CTGAAATTCA CGGACCAGGG CTTCGTGCGC
GTGGAGCTGA CGGCGCTTCC CCCTAGGGGT CTGGAACAGT GCCGCATTCT GTTTTCCGTG
ATGGATACGG GCATCGGCAT CCCTTCGGAA AAACAGCACG ATCTGTTCAC CCCCTTCTTC
CAGGTCGAAG GCGCCTACAC TCGCAGGTAC CAGGGCGCCG GGCTGGGATT GGCCATAGTC
AGGCGGCTGG TCGAGCTCAT GGGCGGACAT ATCACTCTGG ACAGCATTTT CGGAGAGGGG
ACGGAGGTCC ACGTCGCGCT GCCGCTGGGC CTGACCGAGA GCGAGGCGGA CGCCTTGGCG
AGCGCCGAGG ATTTTGAACC CCTGCCCGTC ATGCGCGTGT TGCTGGCCGA GGATGAGCCG
ATCAACGCCC TGGCCGCGAG CAGGATGATC AACCGGGATG GACATGAGGT TATTGTGGCC
GAGAACGGGC GGCAGGTCCT TAATCTGCTC GAAGAACGGG AGTTCGACTG CATCCTGATG
GACATCCAGA TGCCGGTCAT GGACGGTGAG GAGACAACCA GGGCGATCAG GTCCTCCGGC
AAGGCCTATG CAAGCATCCC CATCATCGCC CTGACCGCCT ACTCCATGAG CGGAGACCGC
GAGAAGTTCC TGACGGCCGG AATGAACGAC TATCTGTCCA AACCGTTCAA AATCGAGGAA
TTACGCAGGA CTTTCAGACG TTGCGCAGGC ATTGCGGGCC GAGGGACCGG GTAA
 
Protein sequence
MGAPIGIFTS SPEGRYLSAN PAMARIFGYA SPQALVAASA EVGTGSHADS AEGGAFLRLL 
DVQDEIFDRE TRHLRRDGSE VWVSTSARAV RDSSGKTLHF LGFVTEITPR KQVEAVLAHE
RNLYRDLVAS QPAGVYRLRV LAQKPWGPEE WVEKLESNYT LEMVSDRFCE ILGATREECQ
ANASIVIERM HSEDRADFVA RNVLAVESLS RFTWEGRIES ADGDRWVHFE SVPRSLDNGD
VLWTGILLDI SGFKQAERAS DQRARELAAL HELSMVVSSS LSLDQIVAAS VRVVRETTGS
DMVYLFLRQG ERLLLQAVCP QDSEMLLHEV HEHRVGECLC GLAVLDGEPQ YSNDILSDDR
CTRQECKEAG ILSFAALPLR DGRDVIGVMG LASRTPRDFH PQSEFLETQA HQVSIALVNA
RLYEKANQEL DNRIQAEKTL REREEFIRTV LDNLPVGVAV NTVSPDVRFE YMNELFPRFY
GTTRESITAP EGFWEAAYPE PEFRGKIRGM VTAGCASGSQ ERMCWADVPI MRQDETRFVT
ARNIPLPGTN LMISTVWDVT ERKQAEQAMA RAKDAAESAS QAKNEFLANM SHELRTPLNG
VMAMMQLLEM TPLNGEQTEY VHLARKSSER LTRLLSDLLD ISRIEAGKVE IREEAFAVQE
LLQSVSELFN TSAQSKGVSL ELSTDPSVPP RLKGDAARLR QVLFNLVGNA LKFTDQGFVR
VELTALPPRG LEQCRILFSV MDTGIGIPSE KQHDLFTPFF QVEGAYTRRY QGAGLGLAIV
RRLVELMGGH ITLDSIFGEG TEVHVALPLG LTESEADALA SAEDFEPLPV MRVLLAEDEP
INALAASRMI NRDGHEVIVA ENGRQVLNLL EEREFDCILM DIQMPVMDGE ETTRAIRSSG
KAYASIPIIA LTAYSMSGDR EKFLTAGMND YLSKPFKIEE LRRTFRRCAG IAGRGTG