Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dbac_0831 |
Symbol | |
ID | 8376486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfomicrobium baculatum DSM 4028 |
Kingdom | Bacteria |
Replicon accession | NC_013173 |
Strand | + |
Start bp | 902635 |
End bp | 905508 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645000070 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_003157365 |
Protein GI | 256828637 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGCTC CCATCGGCAT ATTCACGTCC TCGCCCGAAG GCCGCTACCT GTCCGCGAAT CCGGCCATGG CCCGGATTTT TGGCTATGCG TCGCCCCAGG CCTTGGTCGC TGCATCCGCA GAGGTTGGAA CGGGCAGCCA TGCCGATTCT GCCGAGGGGG GCGCGTTCCT GCGGCTTCTG GACGTTCAGG ACGAAATTTT CGACCGGGAA ACCCGTCATC TGCGCCGGGA CGGTTCCGAG GTCTGGGTGT CCACCAGCGC GCGGGCCGTG CGCGACAGCT CCGGAAAAAC GCTGCATTTT TTGGGTTTCG TCACGGAGAT CACGCCCCGC AAGCAGGTCG AGGCGGTCCT GGCCCACGAA CGGAACCTGT ACCGCGATCT TGTCGCCTCG CAGCCTGCCG GAGTGTACAG GTTGCGCGTT TTGGCCCAAA AGCCATGGGG CCCGGAAGAG TGGGTTGAAA AGCTGGAATC CAACTACACG CTTGAAATGG TCAGCGACCG GTTCTGCGAA ATCCTGGGCG CGACCCGGGA AGAGTGCCAA GCTAACGCGA GTATCGTGAT CGAGCGCATG CATTCCGAGG ACAGGGCGGA TTTCGTGGCC AGGAACGTTC TGGCCGTGGA GTCGCTGTCG CGCTTCACCT GGGAGGGACG GATCGAGAGC GCCGATGGGG ATCGCTGGGT CCACTTCGAA TCCGTGCCCA GGTCCCTGGA CAACGGGGAT GTGCTCTGGA CCGGCATTCT GCTGGACATC TCCGGGTTCA AGCAGGCCGA GCGGGCATCG GACCAGAGGG CCCGTGAGCT GGCCGCTCTG CATGAGTTGA GCATGGTCGT CAGTTCCTCG CTGTCCCTGG ACCAGATCGT GGCAGCCTCG GTGCGCGTGG TCCGGGAGAC CACGGGTTCC GACATGGTCT ATCTGTTCCT CCGGCAGGGA GAGCGTCTGC TGCTTCAGGC AGTGTGTCCG CAGGATTCGG AAATGTTGCT GCATGAAGTT CATGAACACC GGGTCGGGGA GTGCTTGTGC GGGCTGGCGG TGCTGGACGG CGAGCCGCAG TACTCCAACG ACATTCTCAG CGATGACCGC TGCACCAGGC AGGAATGCAA GGAGGCCGGT ATCCTGTCCT TCGCGGCGCT GCCGCTTCGC GACGGCCGGG ATGTCATCGG CGTCATGGGA CTGGCTTCCC GCACGCCCAG GGATTTTCAT CCCCAGTCCG AATTTCTGGA GACCCAAGCC CATCAGGTGT CTATCGCCCT GGTCAATGCG CGCCTCTATG AGAAGGCCAA CCAGGAGCTG GACAACCGCA TCCAGGCCGA AAAGACCTTG CGAGAGCGTG AGGAATTCAT CCGCACCGTG CTGGACAATC TGCCCGTAGG CGTGGCCGTG AACACGGTTT CTCCGGACGT CAGGTTCGAG TACATGAATG AGCTCTTCCC CAGGTTTTAC GGAACGACCA GGGAGTCTAT CACCGCCCCC GAGGGATTCT GGGAGGCCGC GTATCCCGAA CCGGAATTCC GGGGAAAGAT TCGCGGGATG GTCACGGCAG GCTGCGCCAG CGGGAGCCAG GAGCGCATGT GCTGGGCTGA TGTGCCCATC ATGCGGCAGG ACGAGACCCG CTTCGTCACC GCCCGCAACA TCCCGCTGCC GGGCACGAAC CTGATGATTT CGACGGTCTG GGACGTGACC GAACGTAAGC AGGCGGAGCA GGCCATGGCC AGGGCCAAGG ATGCGGCCGA GTCCGCCAGC CAGGCTAAAA ACGAATTCCT GGCCAACATG AGCCATGAGC TGCGTACCCC CTTGAACGGC GTCATGGCCA TGATGCAGCT CTTGGAGATG ACGCCTTTGA ACGGCGAGCA GACGGAGTAC GTGCATCTGG CCAGAAAGTC GTCCGAGCGG CTGACTCGCC TGCTGAGCGA TCTGCTGGAC ATCTCGCGTA TCGAGGCCGG CAAGGTCGAG ATACGCGAGG AGGCGTTTGC GGTTCAGGAG CTGCTCCAGT CCGTTTCCGA ACTGTTCAAC ACCAGCGCGC AGAGCAAGGG CGTGTCTCTG GAGCTGTCGA CGGATCCTTC CGTGCCGCCC AGGCTCAAGG GTGACGCGGC CAGGCTCAGG CAGGTGCTTT TCAACCTGGT GGGGAACGCC CTGAAATTCA CGGACCAGGG CTTCGTGCGC GTGGAGCTGA CGGCGCTTCC CCCTAGGGGT CTGGAACAGT GCCGCATTCT GTTTTCCGTG ATGGATACGG GCATCGGCAT CCCTTCGGAA AAACAGCACG ATCTGTTCAC CCCCTTCTTC CAGGTCGAAG GCGCCTACAC TCGCAGGTAC CAGGGCGCCG GGCTGGGATT GGCCATAGTC AGGCGGCTGG TCGAGCTCAT GGGCGGACAT ATCACTCTGG ACAGCATTTT CGGAGAGGGG ACGGAGGTCC ACGTCGCGCT GCCGCTGGGC CTGACCGAGA GCGAGGCGGA CGCCTTGGCG AGCGCCGAGG ATTTTGAACC CCTGCCCGTC ATGCGCGTGT TGCTGGCCGA GGATGAGCCG ATCAACGCCC TGGCCGCGAG CAGGATGATC AACCGGGATG GACATGAGGT TATTGTGGCC GAGAACGGGC GGCAGGTCCT TAATCTGCTC GAAGAACGGG AGTTCGACTG CATCCTGATG GACATCCAGA TGCCGGTCAT GGACGGTGAG GAGACAACCA GGGCGATCAG GTCCTCCGGC AAGGCCTATG CAAGCATCCC CATCATCGCC CTGACCGCCT ACTCCATGAG CGGAGACCGC GAGAAGTTCC TGACGGCCGG AATGAACGAC TATCTGTCCA AACCGTTCAA AATCGAGGAA TTACGCAGGA CTTTCAGACG TTGCGCAGGC ATTGCGGGCC GAGGGACCGG GTAA
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Protein sequence | MGAPIGIFTS SPEGRYLSAN PAMARIFGYA SPQALVAASA EVGTGSHADS AEGGAFLRLL DVQDEIFDRE TRHLRRDGSE VWVSTSARAV RDSSGKTLHF LGFVTEITPR KQVEAVLAHE RNLYRDLVAS QPAGVYRLRV LAQKPWGPEE WVEKLESNYT LEMVSDRFCE ILGATREECQ ANASIVIERM HSEDRADFVA RNVLAVESLS RFTWEGRIES ADGDRWVHFE SVPRSLDNGD VLWTGILLDI SGFKQAERAS DQRARELAAL HELSMVVSSS LSLDQIVAAS VRVVRETTGS DMVYLFLRQG ERLLLQAVCP QDSEMLLHEV HEHRVGECLC GLAVLDGEPQ YSNDILSDDR CTRQECKEAG ILSFAALPLR DGRDVIGVMG LASRTPRDFH PQSEFLETQA HQVSIALVNA RLYEKANQEL DNRIQAEKTL REREEFIRTV LDNLPVGVAV NTVSPDVRFE YMNELFPRFY GTTRESITAP EGFWEAAYPE PEFRGKIRGM VTAGCASGSQ ERMCWADVPI MRQDETRFVT ARNIPLPGTN LMISTVWDVT ERKQAEQAMA RAKDAAESAS QAKNEFLANM SHELRTPLNG VMAMMQLLEM TPLNGEQTEY VHLARKSSER LTRLLSDLLD ISRIEAGKVE IREEAFAVQE LLQSVSELFN TSAQSKGVSL ELSTDPSVPP RLKGDAARLR QVLFNLVGNA LKFTDQGFVR VELTALPPRG LEQCRILFSV MDTGIGIPSE KQHDLFTPFF QVEGAYTRRY QGAGLGLAIV RRLVELMGGH ITLDSIFGEG TEVHVALPLG LTESEADALA SAEDFEPLPV MRVLLAEDEP INALAASRMI NRDGHEVIVA ENGRQVLNLL EEREFDCILM DIQMPVMDGE ETTRAIRSSG KAYASIPIIA LTAYSMSGDR EKFLTAGMND YLSKPFKIEE LRRTFRRCAG IAGRGTG
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