Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0513 |
Symbol | |
ID | 5200487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 553697 |
End bp | 556108 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640580054 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001261019 |
Protein GI | 148553437 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.883754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACGC TGTTCTCCGC CGCCCCGATC TCCGCGAGCT CGGGCCGCTT CGCGCTCAAC CTGCTGCTGG CGGTGCTCGC CTTCATCGCC TCGATCGGCA TGGCCGGGAT GATCTGGGGC GCGACCGACA ATCTGCTGGT CGCCGGCCTG TTCATGCTCG CCTTCTGCCT GGGGATCGGC ATGATCCTGC TGGTGGCGAC GGTCCGCGCG CGAATCCACA GCCGGCCCGT ACGGCTGCTC GACACCGAAC TGCTGCTCGG CACGATCGAG GATTCGGCGT CCGGTGTCGC GATCACCGGA CCGGGTGGCG AGCTGCTCTG CGCCAATCGC CAATATGAGA CCTGGTTCGG CGGGCTGCCG ACGCCGCCGG GCCTGCCGCT CGACGCGGCT ACGCGGATGC AGCTTTCCTC GGCGGCGCTG GCGGCGCGAC GCGACGGCCT CGCCCAGATC GCCGGGTTGT CGACCGATCG CGGCCTGATC GACGTGATCG TCCGGCGCGC GGGCAATGGC GACGATCACC TCGTCTGGCG CTTCCACCGG TCGAGCGAAT TCGACGGCCT GGGCGACATC ATGCGGATGC TGGGCAGCGA GATCGGCCGG CGGATCGGCA GCGCGGGGGT GATGACCGCG CTGGTCGACG GCAATGGCAT CGGCCTCGTC GCCAATCGCG TCTTCCTGCA GCGCGCGCTG GGCTCGGCCG ACGCGCCGAG CGCGGGCTGG GCCTTTGCCG AGCTGCTGCG CAGCGACGGC GACATGATCC GGCTCGCCGC CGATCCCGCC ACCGCCGATC CGGTGCGCCT GATCCAGATA CCCCTCGACA ACCAGGGCGG GGCCGACGCC ACGCTGTTCC TGCTGCTCGA CGAGCCGACC GGCCATGGCG CGGAGGCGCG GGCGGTGGCG ACCGGCGATC TCCACGCGCT GCTCGGCATG CTGCCGATCG GCCTGGCCGT GGCCGAGCGC GACGGCCGCG TCCTGTTCAT GAACAGTTCG TTCCGCCGCG CCGCCGGGCT GGGGCCGGAG GCGACGATCG TCTATCCGAG CGACCTCGTC GTCGAGGAGG ACAAGGCCGC CGTCTCCGAC GCGGTGCGGC GCTTCTCCGC CGGGCGCGGA TCGGCGAGCG ACCTGTCGGT GCGGCTGAAG GAGCGGCCCG AGGAGAATGT CTCGCTGACG ATCGCCGCCG CCAAGGGGCT CGGCAAGGCG TCGGTGCTGC TCAGCCTCAA GGACAATAGC GAGGAGTCGC GGCTCAAGCG GCAGGTCGCC CAGGCGATGA AGATGCAGGC GGTCGGCCAG CTCGCCGGCG GCGTCGCGCA CGACTTCAAC AATATCCTGA CCGCGATCAT CGGCCATTGC GACCTGATGA CGATGCGCCA CATCCCCGGC GACAGCGACT ATGACGACAT CCAGCAGATC AAGCACAATT CGAACCGCGC GGCGGCGCTG ACCCGCCAGC TCCTGGCCTT CTCGCGGCAG CAGACGCTGC GCCCGCAGAT CCTGCAGATC CCCGACGTCA TCTCGGAGAT ATCGAACCTG CTCAACCGGC TGCTGGGCGA GACCGTCCGG CTCGAGGTCA GCCATGGCCG CAACCTCGGC ACCGTCCGCG CCGATCCGGG GCAGCTCGAG CAGGTGATCG TCAACCTCGC CGTCAACGCG CGCGACGCGA TGCCCGACGG CGGCATGCTG ACGATCCACA CCTATGCGGT TTCGCAGGCC GACGTTCGGA GGCTCGGCAT CGAGATCATG CCGGTGACCG AATATACCGC GATGAAGGTG ACCGACACCG GCAGCGGCAT CTCGGCCGAG AACCTCAACA AGATCTTCGA GCCCTTCTTC ACCACCAAGG AGGTGGGCAA GGGCACCGGC CTGGGCCTGT CGACCGTCTA TGGCATCGTC AAGCAGACCG GCGGCTTCAT CTTCGCCGAG AGCGAGGTGG GGGCGGGGAC GAGCTTCGTC ATCTACCTGC CGGTCCATGA GGCGCCCGCC AAGGCCGCCG CCGCCCGCGC GCCGGTCAAG GAGGCGAGCA CCGAGCTGTG GGGCACCGGC ACCATCCTGC TGGTCGAGGA CGAGGCGATG GTGCGCGCCG TCGCCGAGCG GGCGCTGGCG CGGCAGGGCT ACAAGGTCCT CACCGCCACC AACGGCGAGG AGGGGCTGGA GATATTGGAA GCCGGCGAGG AGCCGATCGA CCTCGTCATC TCCGACGTGG TGATGCCGAC GATGGACGGT CCCTCCATGG CCCGCGCGGC GCGCGAGAAG CGGCCCGACC TGCCGATCAT CTTCATGTCG GGCTATGCCG AGGAACAGCT CCGCCGCTCG ATCGACCTCG ACAATATCGG CTTCCTGCCC AAGCCCTTCT CGGTCCAGCA GATCGGCCAG GCCGCGCGGG AGGCGCTCGC GGATCACGCG CGTCTTGGTT AG
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Protein sequence | MATLFSAAPI SASSGRFALN LLLAVLAFIA SIGMAGMIWG ATDNLLVAGL FMLAFCLGIG MILLVATVRA RIHSRPVRLL DTELLLGTIE DSASGVAITG PGGELLCANR QYETWFGGLP TPPGLPLDAA TRMQLSSAAL AARRDGLAQI AGLSTDRGLI DVIVRRAGNG DDHLVWRFHR SSEFDGLGDI MRMLGSEIGR RIGSAGVMTA LVDGNGIGLV ANRVFLQRAL GSADAPSAGW AFAELLRSDG DMIRLAADPA TADPVRLIQI PLDNQGGADA TLFLLLDEPT GHGAEARAVA TGDLHALLGM LPIGLAVAER DGRVLFMNSS FRRAAGLGPE ATIVYPSDLV VEEDKAAVSD AVRRFSAGRG SASDLSVRLK ERPEENVSLT IAAAKGLGKA SVLLSLKDNS EESRLKRQVA QAMKMQAVGQ LAGGVAHDFN NILTAIIGHC DLMTMRHIPG DSDYDDIQQI KHNSNRAAAL TRQLLAFSRQ QTLRPQILQI PDVISEISNL LNRLLGETVR LEVSHGRNLG TVRADPGQLE QVIVNLAVNA RDAMPDGGML TIHTYAVSQA DVRRLGIEIM PVTEYTAMKV TDTGSGISAE NLNKIFEPFF TTKEVGKGTG LGLSTVYGIV KQTGGFIFAE SEVGAGTSFV IYLPVHEAPA KAAAARAPVK EASTELWGTG TILLVEDEAM VRAVAERALA RQGYKVLTAT NGEEGLEILE AGEEPIDLVI SDVVMPTMDG PSMARAAREK RPDLPIIFMS GYAEEQLRRS IDLDNIGFLP KPFSVQQIGQ AAREALADHA RLG
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