| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_4023 |
|---|
| Symbol | |
|---|
| ID | 7387351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Agrobacterium vitis S4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011989 |
|---|
| Strand | - |
|---|
| Start bp | 3388446 |
|---|
| End bp | 3388805 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 643652742 |
|---|
| Product | two component response regulator |
|---|
| Protein accession | YP_002550916 |
|---|
| Protein GI | 222149959 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA TACTGATTAC CGAAGACGAG GATGCCCTGC GGTCCTTCGT TGCCCGGGCG
TTGCGGCTCG ACGGACATGA AACCCATGAG GCGGCAGACG GCGCCGAGGG TCTCGAAATG
CTGGCTACCA GCAATTTCGA TCTGCTGCTG TCGGATATCC GCATGCCGGT CATGGATGGG
ATCGAACTGG CGCACCGCGC CCATTCGGAT TTTCCGGGCC TGAAAATCCT GCTGATGACC
GGCTATGCCG AACAGCGCGA ACGGGCCGAC GATCTGCTTG AAAAAATCAT CGATGTCGTG
CCAAAGCCCT TTGCGCTTCC CGATATCCGC AAGGCCGTTG CACAGGCTTT GACAGCCTGA
|
|---|
| Protein sequence | MAKILITEDE DALRSFVARA LRLDGHETHE AADGAEGLEM LATSNFDLLL SDIRMPVMDG
IELAHRAHSD FPGLKILLMT GYAEQRERAD DLLEKIIDVV PKPFALPDIR KAVAQALTA
|
|---|
| |