Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2248 |
Symbol | |
ID | 5371167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2676776 |
End bp | 2677141 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640830462 |
Product | response regulator receiver protein |
Protein accession | YP_001366449 |
Protein GI | 153000768 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.426629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA AAATATTAAT TGTTGATGAT TCCGCTGCGA TTCGACAAAT GGTCGAAGCG ACCCTTAAAT CGGCTAACTA TCAAGTGGTG CTGGCCAAAG ATGGTCGAGA AGCCCTCGAT ATCTGTAACG GGCAAAAATT TGATTTTATT CTTACTGATC AGAATATGCC GCGAATGGAT GGGCTGACCT TAATTAAATC CTTACGTGCT ATGTCGGCAT TTATGCGAAC TCCGATCATT ATGCTTACGA CCGAAGCGGG CGATGACATG AAGGCGCAAG GAAAAGCGGC AGGTGCGACG GGATGGATGG TAAAACCCTT TGATCCTCAA AAGCTGTTGG CTATTACGGC AAAAGTGCTG GGTTAA
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Protein sequence | MSKKILIVDD SAAIRQMVEA TLKSANYQVV LAKDGREALD ICNGQKFDFI LTDQNMPRMD GLTLIKSLRA MSAFMRTPII MLTTEAGDDM KAQGKAAGAT GWMVKPFDPQ KLLAITAKVL G
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