53 homologs were found in PanDaTox collection
for query gene RPC_2716 on replicon NC_007925
Organism: Rhodopseudomonas palustris BisB18



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007925  RPC_2716  NADP oxidoreductase, coenzyme F420-dependent  100 
 
 		 304 aa  612  9.999999999999999e-175  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.336129  normal  1 
 
 
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NC_010511  M446_5621  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  75.93 
 
 		 304 aa  458  9.999999999999999e-129  Methylobacterium sp. 4-46  Bacteria  normal  0.786606  normal  1 
 
 
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NC_011892  Mnod_8322  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  75.93 
 
 		 304 aa  457  1e-127  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0469353  n/a   
 
 
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NC_011892  Mnod_8622  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  75.76 
 
 		 300 aa  452  1.0000000000000001e-126  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.489612  n/a   
 
 
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NC_010505  Mrad2831_4139  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  74.58 
 
 		 302 aa  447  1.0000000000000001e-124  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847041  normal  1 
 
 
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NC_010524  Lcho_3634  phosphogluconate dehydrogenase, NAD-binding,-like protein  35.06 
 
 		 313 aa  145  7.0000000000000006e-34  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.75811 
 
 
-
 
NC_007778  RPB_0875  6-phosphogluconate dehydrogenase, NAD-binding  31.49 
 
 		 309 aa  137  2e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.651472  normal  0.39983 
 
 
-
 
NC_009485  BBta_2699  dehydrogenase  33.95 
 
 		 312 aa  136  4e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.647846  normal  0.600019 
 
 
-
 
NC_007908  Rfer_0336  6-phosphogluconate dehydrogenase, NAD-binding  32.15 
 
 		 308 aa  132  6.999999999999999e-30  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_2165  6-phosphogluconate dehydrogenase, NAD-binding  34.17 
 
 		 299 aa  130  3e-29  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal  0.0994663 
 
 
-
 
NC_011004  Rpal_5180  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.99 
 
 		 309 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_1455  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  33.33 
 
 		 298 aa  123  5e-27  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012792  Vapar_5740  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  31.41 
 
 		 301 aa  122  9.999999999999999e-27  Variovorax paradoxus S110  Bacteria  normal  0.659534  n/a   
 
 
-
 
NC_009832  Spro_2089  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  34.35 
 
 		 295 aa  119  4.9999999999999996e-26  Serratia proteamaculans 568  Bacteria  normal  0.891235  normal  1 
 
 
-
 
NC_009512  Pput_1359  6-phosphogluconate dehydrogenase, NAD-binding  31.72 
 
 		 296 aa  117  3e-25  Pseudomonas putida F1  Bacteria  normal  0.234079  normal  0.110922 
 
 
-
 
NC_008254  Meso_1049  6-phosphogluconate dehydrogenase, NAD-binding  30.04 
 
 		 294 aa  115  1.0000000000000001e-24  Chelativorans sp. BNC1  Bacteria  normal  0.0780774  n/a   
 
 
-
 
NC_008148  Rxyl_0198  6-phosphogluconate dehydrogenase, NAD-binding protein  32.71 
 
 		 261 aa  108  1e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_4024  6-phosphogluconate dehydrogenase NAD-binding protein  30.51 
 
 		 263 aa  107  3e-22  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.0632878 
 
 
-
 
NC_013946  Mrub_2676  Phosphogluconate dehydrogenase NAD-binding, putative  33.33 
 
 		 262 aa  107  3e-22  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal  0.076232 
 
 
-
 
NC_008254  Meso_1079  6-phosphogluconate dehydrogenase, NAD-binding  30.23 
 
 		 300 aa  107  4e-22  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013757  Gobs_3786  6-phosphogluconate dehydrogenase, NAD-binding protein  32.95 
 
 		 293 aa  101  2e-20  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.622459  n/a   
 
 
-
 
NC_013205  Aaci_1610  NAD-binding phsophogluconase dehydrogenase-like protein  31.56 
 
 		 288 aa  98.6  1e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2815  6-phosphogluconate dehydrogenase, NAD-binding  30.82 
 
 		 277 aa  89.4  6e-17  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.256633  n/a   
 
 
-
 
NC_007509  Bcep18194_C7576  6-phosphogluconate dehydrogenase, NAD-binding  29.69 
 
 		 298 aa  88.2  2e-16  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0601  6-phosphogluconate dehydrogenase, NAD-binding  28.83 
 
 		 288 aa  85.5  9e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0286951  normal  0.472195 
 
 
-
 
NC_011886  Achl_0096  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  29.58 
 
 		 259 aa  79.7  0.00000000000006  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013757  Gobs_2243  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  27.95 
 
 		 262 aa  76.3  0.0000000000006  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008786  Veis_3257  6-phosphogluconate dehydrogenase, NAD-binding  28.11 
 
 		 293 aa  74.3  0.000000000003  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.00764055  normal  0.245647 
 
 
-
 
NC_010002  Daci_4431  6-phosphogluconate dehydrogenase NAD-binding  27.85 
 
 		 286 aa  70.9  0.00000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.182897  normal  0.586464 
 
 
-
 
NC_007413  Ava_4075  6-phosphogluconate dehydrogenase, NAD-binding  26.28 
 
 		 299 aa  65.9  0.0000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.546108 
 
 
-
 
NC_011371  Rleg2_6367  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.89 
 
 		 288 aa  62  0.00000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.707828  normal  0.820897 
 
 
-
 
NC_014210  Ndas_1131  Dimethylmenaquinone methyltransferase  29.87 
 
 		 450 aa  61.6  0.00000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_1825  hypothetical protein  26.01 
 
 		 284 aa  53.5  0.000004  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012852  Rleg_6188  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.19 
 
 		 282 aa  50.4  0.00003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.465928  normal  0.388125 
 
 
-
 
NC_009484  Acry_2433  6-phosphogluconate dehydrogenase, NAD-binding  25.93 
 
 		 302 aa  48.5  0.0001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_2366  3-hydroxyisobutyrate dehydrogenase  26.14 
 
 		 301 aa  48.5  0.0002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009921  Franean1_2354  putative dehydrogenase  25.93 
 
 		 291 aa  45.1  0.001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0342021 
 
 
-
 
NC_008786  Veis_2017  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding  40.57 
 
 		 352 aa  45.4  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  0.451307 
 
 
-
 
NC_008786  Veis_1431  6-phosphogluconate dehydrogenase, NAD-binding  27.4 
 
 		 297 aa  45.8  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3480  2-hydroxy-3-oxopropionate reductase  26.64 
 
 		 304 aa  45.1  0.002  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_1570  2-hydroxy-3-oxopropionate reductase  27.91 
 
 		 297 aa  44.7  0.002  Pseudomonas putida F1  Bacteria  normal  0.101448  normal  0.880113 
 
 
-
 
NC_007908  Rfer_0979  6-phosphogluconate dehydrogenase, NAD-binding  26.67 
 
 		 315 aa  44.7  0.002  Rhodoferax ferrireducens T118  Bacteria  normal  0.103843  n/a   
 
 
-
 
NC_012856  Rpic12D_3153  2-hydroxy-3-oxopropionate reductase  27.1 
 
 		 304 aa  44.3  0.003  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.636013 
 
 
-
 
NC_009720  Xaut_2369  2-hydroxy-3-oxopropionate reductase  24.27 
 
 		 292 aa  43.9  0.004  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
CP001800  Ssol_1952  3-hydroxyisobutyrate dehydrogenase  21.09 
 
 		 289 aa  43.9  0.004  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_002947  PP_4299  2-hydroxy-3-oxopropionate reductase  27.13 
 
 		 297 aa  43.5  0.005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0004  6-phosphogluconate dehydrogenase-like protein  27.65 
 
 		 290 aa  43.1  0.005  Salinispora tropica CNB-440  Bacteria  hitchhiker  0.00000473013  hitchhiker  0.00414956 
 
 
-
 
NC_009952  Dshi_2443  3-hydroxyisobutyrate dehydrogenase related protein  23.64 
 
 		 289 aa  43.1  0.006  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3831  2-hydroxy-3-oxopropionate reductase  23.27 
 
 		 296 aa  42.7  0.007  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009440  Msed_1759  6-phosphogluconate dehydrogenase, NAD-binding  25.78 
 
 		 289 aa  42.7  0.007  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  0.271447 
 
 
-
 
NC_008463  PA14_45020  putative oxidoreductase  23.27 
 
 		 296 aa  42.7  0.007  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.820061  normal  1 
 
 
-
 
NC_009620  Smed_4270  3-hydroxyisobutyrate dehydrogenase  27.03 
 
 		 295 aa  42.7  0.008  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011991  Avi_9609  3-hydroxyisobutyrate dehydrogenase  22.33 
 
 		 288 aa  42.4  0.009  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
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