Gene Rpic12D_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3153 
Symbol 
ID8020837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3321080 
End bp3321994 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID644831949 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_002983092 
Protein GI241664732 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.636013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CAACTCTGAA CCTCGGTTTC ATCGGCCTCG GCATCATGGG CGCCCCCATG 
GCAGGTCACC TGCGCGCAGC AGGCCACACG CTCTTCGTGC ACGACGTCAA CCCGGCACCC
GCCGCGCTGG TGGAAGCCGG CGTGACGGTC TGCACGAGCG CGGAAGAAGT CGCCAAGCGT
GCCGACATCA TCTTCATCAT GGTGCCGGAC ACCCCGCACG TTGAAGCGGT GCTGTTCAGC
GAGAAGGGCG TCGCCAAGGC GCTGAAGGAT GCCGGCAAGG ATGCTGCAGC CGGCAAGATC
GTGGTCGACA TGAGTTCGAT CTCGCCGATT GCGACGAAGG ACTTTGCTGC CCGCATCAAC
AAGACCGGCG CGCAATACCT GGACGCTCCG GTGTCGGGTG GCGAAGTGGG CGCGAAGGCC
GCATCGCTGA CGATCATGGT GGGCGGTGAG CAGGCTGCGT TCGACCGTGT TGCTCCGCTG
TTCAACCTGA TGGGCAAGAA CATCACGCTG GTCGGCGGCA ACGGTGACGG CCAGACCACG
AAGGTGGCCA ACCAGATCAT CGTGGCACTG AACATCCAGG CCGTGTCGGA AGCGCTGCTG
TTCGCATCGA AGGCGGGTGC CGATCCCGCA AAGGTACGTC AGGCACTGAT GGGCGGCTTC
GCTGCGTCGC GCATTCTTGA AGTGCACGGC GAGCGCATGG TGAAGCGCAC GTTCGACCCG
GGCTTCCGCA TCGAGCTGCA CCAGAAGGAC TTGAACCTGG CCCTGCAGGG CGCCAAGACG
CTGGGCGTGG CCCTGCCGAA CACGGCCACC GCGCAGGAGC TGTTCAACAC CTGCGCCGCC
AACGGCATGG GCAAGCAAGA TCATTCGGCC CTGTGCCGCG CGATCGAGAT CATGTCGAAC
CACGACATCG CCTGA
 
Protein sequence
MATATLNLGF IGLGIMGAPM AGHLRAAGHT LFVHDVNPAP AALVEAGVTV CTSAEEVAKR 
ADIIFIMVPD TPHVEAVLFS EKGVAKALKD AGKDAAAGKI VVDMSSISPI ATKDFAARIN
KTGAQYLDAP VSGGEVGAKA ASLTIMVGGE QAAFDRVAPL FNLMGKNITL VGGNGDGQTT
KVANQIIVAL NIQAVSEALL FASKAGADPA KVRQALMGGF AASRILEVHG ERMVKRTFDP
GFRIELHQKD LNLALQGAKT LGVALPNTAT AQELFNTCAA NGMGKQDHSA LCRAIEIMSN
HDIA