Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3153 |
Symbol | |
ID | 8020837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3321080 |
End bp | 3321994 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644831949 |
Product | 2-hydroxy-3-oxopropionate reductase |
Protein accession | YP_002983092 |
Protein GI | 241664732 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.636013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAACCG CAACTCTGAA CCTCGGTTTC ATCGGCCTCG GCATCATGGG CGCCCCCATG GCAGGTCACC TGCGCGCAGC AGGCCACACG CTCTTCGTGC ACGACGTCAA CCCGGCACCC GCCGCGCTGG TGGAAGCCGG CGTGACGGTC TGCACGAGCG CGGAAGAAGT CGCCAAGCGT GCCGACATCA TCTTCATCAT GGTGCCGGAC ACCCCGCACG TTGAAGCGGT GCTGTTCAGC GAGAAGGGCG TCGCCAAGGC GCTGAAGGAT GCCGGCAAGG ATGCTGCAGC CGGCAAGATC GTGGTCGACA TGAGTTCGAT CTCGCCGATT GCGACGAAGG ACTTTGCTGC CCGCATCAAC AAGACCGGCG CGCAATACCT GGACGCTCCG GTGTCGGGTG GCGAAGTGGG CGCGAAGGCC GCATCGCTGA CGATCATGGT GGGCGGTGAG CAGGCTGCGT TCGACCGTGT TGCTCCGCTG TTCAACCTGA TGGGCAAGAA CATCACGCTG GTCGGCGGCA ACGGTGACGG CCAGACCACG AAGGTGGCCA ACCAGATCAT CGTGGCACTG AACATCCAGG CCGTGTCGGA AGCGCTGCTG TTCGCATCGA AGGCGGGTGC CGATCCCGCA AAGGTACGTC AGGCACTGAT GGGCGGCTTC GCTGCGTCGC GCATTCTTGA AGTGCACGGC GAGCGCATGG TGAAGCGCAC GTTCGACCCG GGCTTCCGCA TCGAGCTGCA CCAGAAGGAC TTGAACCTGG CCCTGCAGGG CGCCAAGACG CTGGGCGTGG CCCTGCCGAA CACGGCCACC GCGCAGGAGC TGTTCAACAC CTGCGCCGCC AACGGCATGG GCAAGCAAGA TCATTCGGCC CTGTGCCGCG CGATCGAGAT CATGTCGAAC CACGACATCG CCTGA
|
Protein sequence | MATATLNLGF IGLGIMGAPM AGHLRAAGHT LFVHDVNPAP AALVEAGVTV CTSAEEVAKR ADIIFIMVPD TPHVEAVLFS EKGVAKALKD AGKDAAAGKI VVDMSSISPI ATKDFAARIN KTGAQYLDAP VSGGEVGAKA ASLTIMVGGE QAAFDRVAPL FNLMGKNITL VGGNGDGQTT KVANQIIVAL NIQAVSEALL FASKAGADPA KVRQALMGGF AASRILEVHG ERMVKRTFDP GFRIELHQKD LNLALQGAKT LGVALPNTAT AQELFNTCAA NGMGKQDHSA LCRAIEIMSN HDIA
|
| |