| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5740 |
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| Symbol | |
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| ID | 7974861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 446583 |
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| End bp | 447488 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796321 |
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| Product | Phosphogluconate dehydrogenase, NAD-binding, putative-like protein |
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| Protein accession | YP_002947595 |
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| Protein GI | 239820410 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.659534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATCA CACTGGGCAT CATCGGTTGC GGCGAAGTGG GCGGCATCTT CGGCCGCGGC
CTGCTGCACA AGGAAGGCGT CGAGGCGGTC TGGGTCTGGG ACCTGAAATT CGCCGACTCC
GACGGCGGCG CGGCAGCACG CGCCGCCGCC GAAGCCGGCG GCCTGCGCGT CGCCTCGGGC
ATGCAGGCGC TGTGCGCCGC GTCCGATCTG CTGATCTCGG CCGTGACCGC ATCCAGCACC
TTCGCGGTGG CCGAGGAAGC GGCGCGGCAT GCGCGGGCGG GCATGCGCTT TCTCGATCTC
AACTCGGCCT CGCCCGGCAC CAAGCAGCGG GCCGGCGCCG TGCTCGAAGC CGCCGGCGCC
GGCTATGTGG AAGCCGGCGT GATGACCTCG GTGCCGCCCT ACGGCATCCG CGTGCCCATG
CTGCTGGGCG GCGCCCAGGC CGAGACACTC GCGGCCACGC TGTGCGCATG GGGCATGGAC
GCGCGCGCCG TGAGCGAGCG GCTCGGCGTG GCCTCGGCCA TCAAGATGAG CCGCAGCATC
ATGATCAAGG GGCTGGAGGC GCTGGTGATC GAAAGCTACA CCACGGCGCG GCGCTACGGC
GTGGAGGCGC ATGTGCTGCC CACGCTCGCC GAGACCTTTC CGCAGATCGA CTGGGAGCGC
CAGGGCGCCT ACTTCTTCAG CCGCGTCGTG CAGCATGGCA AGCGGCGCGC CGAGGAAATG
CGCGAAGCGG CGCAGACTGT TCGCGAGACC GGCTTCGAGC CTTTCATGGC GGCGGCCATT
GCAGGCAAGC AGGACTGGGT GGCACAGCAG GCGCGCACCG GCCTCTTCGA CGGACTGGAC
GCCAAGAGCC CGTGGCAGGA CTACGCCGAC CGCCTGATCG GCAGAGGGCA GGGCGGCGAG
AAATGA
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| Protein sequence | MGITLGIIGC GEVGGIFGRG LLHKEGVEAV WVWDLKFADS DGGAAARAAA EAGGLRVASG
MQALCAASDL LISAVTASST FAVAEEAARH ARAGMRFLDL NSASPGTKQR AGAVLEAAGA
GYVEAGVMTS VPPYGIRVPM LLGGAQAETL AATLCAWGMD ARAVSERLGV ASAIKMSRSI
MIKGLEALVI ESYTTARRYG VEAHVLPTLA ETFPQIDWER QGAYFFSRVV QHGKRRAEEM
REAAQTVRET GFEPFMAAAI AGKQDWVAQQ ARTGLFDGLD AKSPWQDYAD RLIGRGQGGE
K
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