38 homologs were found in PanDaTox collection
for query gene Vapar_5740 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012792  Vapar_5740  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  100 
 
 		 301 aa  600  1.0000000000000001e-171  Variovorax paradoxus S110  Bacteria  normal  0.659534  n/a   
 
 
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NC_008781  Pnap_2165  6-phosphogluconate dehydrogenase, NAD-binding  70 
 
 		 299 aa  386  1e-106  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal  0.0994663 
 
 
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NC_007778  RPB_0875  6-phosphogluconate dehydrogenase, NAD-binding  54.7 
 
 		 309 aa  286  2.9999999999999996e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.651472  normal  0.39983 
 
 
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NC_010524  Lcho_3634  phosphogluconate dehydrogenase, NAD-binding,-like protein  51.34 
 
 		 313 aa  284  1.0000000000000001e-75  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.75811 
 
 
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NC_009485  BBta_2699  dehydrogenase  53.49 
 
 		 312 aa  282  5.000000000000001e-75  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.647846  normal  0.600019 
 
 
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NC_011004  Rpal_5180  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  53.54 
 
 		 309 aa  276  4e-73  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
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NC_007908  Rfer_0336  6-phosphogluconate dehydrogenase, NAD-binding  48.99 
 
 		 308 aa  265  1e-69  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009832  Spro_2089  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  44.64 
 
 		 295 aa  209  4e-53  Serratia proteamaculans 568  Bacteria  normal  0.891235  normal  1 
 
 
-
 
NC_008254  Meso_1079  6-phosphogluconate dehydrogenase, NAD-binding  39.77 
 
 		 300 aa  196  3e-49  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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NC_009512  Pput_1359  6-phosphogluconate dehydrogenase, NAD-binding  44.27 
 
 		 296 aa  196  5.000000000000001e-49  Pseudomonas putida F1  Bacteria  normal  0.234079  normal  0.110922 
 
 
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NC_010501  PputW619_1455  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  41.58 
 
 		 298 aa  189  5e-47  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7576  6-phosphogluconate dehydrogenase, NAD-binding  46.67 
 
 		 298 aa  189  7e-47  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_1049  6-phosphogluconate dehydrogenase, NAD-binding  35.38 
 
 		 294 aa  156  5.0000000000000005e-37  Chelativorans sp. BNC1  Bacteria  normal  0.0780774  n/a   
 
 
-
 
NC_007925  RPC_2716  NADP oxidoreductase, coenzyme F420-dependent  31.41 
 
 		 304 aa  130  3e-29  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.336129  normal  1 
 
 
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NC_011892  Mnod_8622  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  31.99 
 
 		 300 aa  129  7.000000000000001e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.489612  n/a   
 
 
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NC_010505  Mrad2831_4139  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  32.53 
 
 		 302 aa  127  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.847041  normal  1 
 
 
-
 
NC_007794  Saro_2815  6-phosphogluconate dehydrogenase, NAD-binding  37.12 
 
 		 277 aa  126  5e-28  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.256633  n/a   
 
 
-
 
NC_011892  Mnod_8322  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  31.47 
 
 		 304 aa  121  9.999999999999999e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0469353  n/a   
 
 
-
 
NC_010511  M446_5621  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  31.72 
 
 		 304 aa  119  4.9999999999999996e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.786606  normal  1 
 
 
-
 
NC_013205  Aaci_1610  NAD-binding phsophogluconase dehydrogenase-like protein  30.86 
 
 		 288 aa  105  8e-22  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_2676  Phosphogluconate dehydrogenase NAD-binding, putative  35.75 
 
 		 262 aa  103  4e-21  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal  0.076232 
 
 
-
 
NC_013757  Gobs_3786  6-phosphogluconate dehydrogenase, NAD-binding protein  32.71 
 
 		 293 aa  94.4  2e-18  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.622459  n/a   
 
 
-
 
NC_013730  Slin_4024  6-phosphogluconate dehydrogenase NAD-binding protein  28.24 
 
 		 263 aa  90.9  2e-17  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.0632878 
 
 
-
 
NC_008786  Veis_3257  6-phosphogluconate dehydrogenase, NAD-binding  29.8 
 
 		 293 aa  86.3  6e-16  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.00764055  normal  0.245647 
 
 
-
 
NC_014210  Ndas_1131  Dimethylmenaquinone methyltransferase  32.88 
 
 		 450 aa  74.7  0.000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_4431  6-phosphogluconate dehydrogenase NAD-binding  28.29 
 
 		 286 aa  73.6  0.000000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.182897  normal  0.586464 
 
 
-
 
NC_013757  Gobs_2243  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.21 
 
 		 262 aa  68.9  0.00000000008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_2354  putative dehydrogenase  30.77 
 
 		 291 aa  68.2  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0342021 
 
 
-
 
NC_008148  Rxyl_0198  6-phosphogluconate dehydrogenase, NAD-binding protein  30.72 
 
 		 261 aa  68.2  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
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NC_007413  Ava_4075  6-phosphogluconate dehydrogenase, NAD-binding  25.77 
 
 		 299 aa  66.6  0.0000000005  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.546108 
 
 
-
 
NC_008781  Pnap_0601  6-phosphogluconate dehydrogenase, NAD-binding  27.17 
 
 		 288 aa  64.7  0.000000002  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0286951  normal  0.472195 
 
 
-
 
NC_011886  Achl_0096  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  25.84 
 
 		 259 aa  63.5  0.000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009485  BBta_5125  putative 3-hydroxyisobutyrate dehydrogenase  28.57 
 
 		 293 aa  51.6  0.00002  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.161405 
 
 
-
 
NC_012852  Rleg_6188  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  27.8 
 
 		 282 aa  47  0.0004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.465928  normal  0.388125 
 
 
-
 
NC_009485  BBta_4160  hypothetical protein  27.81 
 
 		 272 aa  45.8  0.001  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.911147 
 
 
-
 
NC_011371  Rleg2_6367  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.02 
 
 		 288 aa  43.9  0.003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.707828  normal  0.820897 
 
 
-
 
NC_009636  Smed_2232  6-phosphogluconate dehydrogenase NAD-binding  31.54 
 
 		 288 aa  43.1  0.006  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  1 
 
 
-
 
NC_010505  Mrad2831_1794  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30 
 
 		 280 aa  42.7  0.008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0510209 
 
 
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