Gene Veis_3257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3257 
Symbol 
ID4695091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp3633783 
End bp3634664 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID639851020 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_998005 
Protein GI121610198 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00764055 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.245647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CAGTCATCGG CCTCGGTGAG GTTGGCCGCT GTTATGCCAA GGCCCTGCAC 
ATCGCTGGTT TTCAGTTGCG CCTGTGTGAC ACCCGCCCTG CCCCGGTCGC CAGCGCGTTG
GCCGCGACTT GGGAACTGCC CATACAAACC TCCGTCGGAG ACTGGCTGCG GGAATGCGAC
TGGATGCTTT CTTGCGTCAC AGGCGCACAT GCGCTCGGCG TTGCAGAACA GTGCCTGGCC
CACGCACACC CGGGAGCCGC TCTGTGCGAC TTGACCACGG CCAGCCCCGA CACCAAACGC
AGCGCCGCCA AGCTGGCAGC GGCTCGATCG ATTCGTTACA TCGATGTGGC CATCATGGGT
GCAATTTCGT TGAGTCTCGA AAAAACGCCG CTTCTGGCGT CTGGCGCAAG CGCCGCAGAA
TTTGCCGAGC TACTGACCAG GGCAGGCGGC AATGCCCGCG CAATCCATGG TGGCGCTGCA
GGTGATGCCA TCGCGCTGAA GATTTTGCGA AGCGTCTTCA CCAAGGGCAT GGAGGCGCTT
GGCGTTGAAC TACTGATGGC GGCCGAGGCC CAAGGTGTGC GCGAAAAACT CTACACGCAG
TTGCGCGACA TCGACGAAAC ACCGCTGCGC ACGTTCATCG ACATGCTCGT GCGCACACAC
GTCATCCATG CCCGCCGCCG CGCGCATGAG GTTCATGATG CCGCCGCCGA GTTGGCCAAA
CACGGCATTC CATCGGTCGT TCTGCCCGGC GTCGAAGAAC GCTTCGCCAA AACGATTGCG
AAACTGGAAA CCCAAGCGCC ACCCCAGACA GAGCCCACGA TCGAAGAAGC GCTCGCTTGG
TTGCTCGGGA AAACCCAACC CACTGGAGCG GGTAAAGGGT GA
 
Protein sequence
MKIAVIGLGE VGRCYAKALH IAGFQLRLCD TRPAPVASAL AATWELPIQT SVGDWLRECD 
WMLSCVTGAH ALGVAEQCLA HAHPGAALCD LTTASPDTKR SAAKLAAARS IRYIDVAIMG
AISLSLEKTP LLASGASAAE FAELLTRAGG NARAIHGGAA GDAIALKILR SVFTKGMEAL
GVELLMAAEA QGVREKLYTQ LRDIDETPLR TFIDMLVRTH VIHARRRAHE VHDAAAELAK
HGIPSVVLPG VEERFAKTIA KLETQAPPQT EPTIEEALAW LLGKTQPTGA GKG