| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_1455 |
|---|
| Symbol | |
|---|
| ID | 6110384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 1593590 |
|---|
| End bp | 1594486 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641621230 |
|---|
| Product | phosphogluconate dehydrogenase, NAD-binding, putative-like protein |
|---|
| Protein accession | YP_001748329 |
|---|
| Protein GI | 170720641 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACATCA AAACGCTGGG GTTGATTGGT TTTGGCGAGG CCGGTGCGAT ACTCGCCCAA
GATATTGCCC GCCAGGGTGT CCATGTGCAG GTATACGACA AGCTTCAGCA AGATGAAGCT
TGTCGCGGCG CCCTGTTGAC AAAGGCACAG GCATGTGGGG TCAGGCTTTG TGCTTCGGCT
ATCGATGCCA GTGACGGCGC CGACCTGGTC ATGTCTGCAG TGACCGCCGG TGCCGCCCTT
GAGGTCGCCC TGCACCTCAT GCCACAGCTC AGATCCGGGC AAGTTTTCAT GGATCTGAAT
TCTGTGGCGC CAGCAACAAA AAAAGCAGCG CACCAAGCCG CAACGCACCA TGGTGTGGAC
TATGTCGATG CGGCAGTCAT GGCACCGCTG CCGCCACAGC GCTTGAAAAC CCCCATGCTA
CTGGGCGGCC CTCGGGCACT TGAACTCGAA ACTGCGCTAA AGGGGCTCGG CTTGAATGTT
CAAACCGTAG CAAACACCAT TGGTGTGGCG TCTTCCATCA AGATGTGCCG CAGCATAATG
ATCAAAGGGC TTGAAGCGTT GACAACCGAG TGCATGGCCA CTGCGCGGCA ATATGGCGCA
GAGGATTTCG TACTCGCTTC ACTGCATGAA AGCTTTCCTG GCTCAGGCTG GGACGGAACA
CTTGCGCACT ATCTCATCAG CCGAGTCGCC GAACATGGCT TCAGACGCGC AGAGGAGATG
GAGGAAGTAG CGCGAACGGT ATCTGACGTT GGCGTGGATG CGAATATGAG CTTGGCGACT
GCCGCAACAC AGCGCGCATT TGCACAAGCG ATCCGTAACG CAGGGCTTGT ATATGCCGAC
CTTCTGCCTT TTGACTGGGT TCAGGTAGTC GATAAACTAC AGGCCACGCC CACCTAA
|
|---|
| Protein sequence | MYIKTLGLIG FGEAGAILAQ DIARQGVHVQ VYDKLQQDEA CRGALLTKAQ ACGVRLCASA
IDASDGADLV MSAVTAGAAL EVALHLMPQL RSGQVFMDLN SVAPATKKAA HQAATHHGVD
YVDAAVMAPL PPQRLKTPML LGGPRALELE TALKGLGLNV QTVANTIGVA SSIKMCRSIM
IKGLEALTTE CMATARQYGA EDFVLASLHE SFPGSGWDGT LAHYLISRVA EHGFRRAEEM
EEVARTVSDV GVDANMSLAT AATQRAFAQA IRNAGLVYAD LLPFDWVQVV DKLQATPT
|
|---|
| |