31 homologs were found in PanDaTox collection
for query gene Franean1_2354 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_2354  putative dehydrogenase  100 
 
 
291 aa  561  1.0000000000000001e-159  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0342021 
 
 
-
 
NC_007413  Ava_4075  6-phosphogluconate dehydrogenase, NAD-binding  36.36 
 
 
299 aa  139  3.9999999999999997e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.546108 
 
 
-
 
NC_009485  BBta_4160  hypothetical protein  39.45 
 
 
272 aa  128  1.0000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.911147 
 
 
-
 
NC_011371  Rleg2_6367  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  35.74 
 
 
288 aa  124  3e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.707828  normal  0.820897 
 
 
-
 
NC_012852  Rleg_6188  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  34.47 
 
 
282 aa  105  7e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.465928  normal  0.388125 
 
 
-
 
NC_010505  Mrad2831_1794  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  37.26 
 
 
280 aa  93.6  4e-18  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0510209 
 
 
-
 
NC_006670  CNA01130  conserved hypothetical protein  29.41 
 
 
316 aa  81.6  0.00000000000001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.174189  n/a   
 
 
-
 
NC_010501  PputW619_1455  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  33.78 
 
 
298 aa  73.2  0.000000000005  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_1825  hypothetical protein  29.55 
 
 
284 aa  69.7  0.00000000006  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_2165  6-phosphogluconate dehydrogenase, NAD-binding  31.94 
 
 
299 aa  68.9  0.00000000009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal  0.0994663 
 
 
-
 
NC_008254  Meso_1079  6-phosphogluconate dehydrogenase, NAD-binding  29.44 
 
 
300 aa  68.6  0.0000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_1049  6-phosphogluconate dehydrogenase, NAD-binding  30.37 
 
 
294 aa  67.4  0.0000000003  Chelativorans sp. BNC1  Bacteria  normal  0.0780774  n/a   
 
 
-
 
NC_007778  RPB_0875  6-phosphogluconate dehydrogenase, NAD-binding  29.63 
 
 
309 aa  66.6  0.0000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.651472  normal  0.39983 
 
 
-
 
NC_011004  Rpal_5180  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.24 
 
 
309 aa  65.5  0.0000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3634  phosphogluconate dehydrogenase, NAD-binding,-like protein  29.17 
 
 
313 aa  64.7  0.000000002  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.75811 
 
 
-
 
NC_009512  Pput_1359  6-phosphogluconate dehydrogenase, NAD-binding  30.43 
 
 
296 aa  62.8  0.000000007  Pseudomonas putida F1  Bacteria  normal  0.234079  normal  0.110922 
 
 
-
 
NC_007908  Rfer_0336  6-phosphogluconate dehydrogenase, NAD-binding  28.24 
 
 
308 aa  61.2  0.00000002  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5740  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.4 
 
 
301 aa  58.2  0.0000002  Variovorax paradoxus S110  Bacteria  normal  0.659534  n/a   
 
 
-
 
NC_009485  BBta_2699  dehydrogenase  27.67 
 
 
312 aa  57  0.0000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.647846  normal  0.600019 
 
 
-
 
NC_009832  Spro_2089  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.99 
 
 
295 aa  52.4  0.00001  Serratia proteamaculans 568  Bacteria  normal  0.891235  normal 
 
 
-
 
NC_013757  Gobs_3786  6-phosphogluconate dehydrogenase, NAD-binding protein  32.04 
 
 
293 aa  51.2  0.00002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.622459  n/a   
 
 
-
 
NC_007794  Saro_2815  6-phosphogluconate dehydrogenase, NAD-binding  29.9 
 
 
277 aa  47.8  0.0002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.256633  n/a   
 
 
-
 
NC_013946  Mrub_2676  Phosphogluconate dehydrogenase NAD-binding, putative  30.86 
 
 
262 aa  47.8  0.0002  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal  0.076232 
 
 
-
 
NC_013730  Slin_4024  6-phosphogluconate dehydrogenase NAD-binding protein  34.69 
 
 
263 aa  47.4  0.0003  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.0632878 
 
 
-
 
NC_007925  RPC_2716  NADP oxidoreductase, coenzyme F420-dependent  25.93 
 
 
304 aa  45.1  0.001  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.336129  normal 
 
 
-
 
NC_013205  Aaci_1610  NAD-binding phsophogluconase dehydrogenase-like protein  28.52 
 
 
288 aa  44.7  0.002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011892  Mnod_8322  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  26.71 
 
 
304 aa  44.3  0.003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0469353  n/a   
 
 
-
 
NC_008578  Acel_1045  6-phosphogluconate dehydrogenase, NAD-binding  31.03 
 
 
305 aa  43.5  0.004  Acidothermus cellulolyticus 11B  Bacteria  normal  0.0255982  normal  0.0907231 
 
 
-
 
NC_011892  Mnod_8622  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  25.72 
 
 
300 aa  43.5  0.004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.489612  n/a   
 
 
-
 
NC_011886  Achl_0096  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  31.58 
 
 
259 aa  42.4  0.008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007955  Mbur_1997  prephenate dehydrogenase  28.69 
 
 
437 aa  42.4  0.01  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
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