Gene Meso_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1049 
Symbol 
ID4180368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1153116 
End bp1154000 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content62% 
IMG OID638066930 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_673611 
Protein GI110633403 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0780774 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTG CGTTCATCGG TTTCGGCGAG GCCGCGCAGG CGATGGCGCT CGGCTTCAAA 
GCCGAAAGGA GCCTCGAGCG GCTTTCCGTC TACGATATTC GCTCCAATGA TCCGGCGCAG
GCGCCGGTAT TAGAGGCCAA GGCAGCGGAG CTGGATGTCT TCCTGGCGCC GTCGGCCGCC
GAGGCAATCA ACGAATCGCC CATCGTGCTC TCGCTCGTGC AGGGTTCAGT GGCGGTGAAG
GTGGCTGAAT CGGTGGCGCC GCTTCTTGCC GAGGGGCAGA TCTATATCGA CCTCAATTCC
GTCTCCCCTG ATACCAAGCG CCGCGTGGCG GATGTCATCG CTGGAGGAGG CCGCGGAGAT
TGTGTCGAAG GCGCGATCAT GGATGCCGTC CGGCCGAAGA ACCATAAGGT GCCCATCCTG
CTTGCCGGCC CCCGCGCGGG CGAAGCGGCG GACAAGCTGA ATGCAGCCGG TATGAACAGC
GAGGCGATCG GCGAGAATAT CGGGCAGGCC TGTGCCGTAA AGATGATCCG CAGCGTGATG
ATGAAGGGCG TGGAAGCGCT CATCCTCGAA AGCATGGTCG CGGCGGAAAC GGCGGGTGTC
ACGGAGCGCA TTCTCGATTC GGTGAACACC ACCTTCAAAG GCCTCGATTG GCGCCAGCTC
ACCTCGCATT ACCTAAAGCG GACCCATGAG CATGGCGCGC GCCGTGTATC GGAGATGAAG
GAATCCGCCG CGACGGTAAA GGGCCTTGGG CTGGAGCCTT ATATGTCGAC CGCCATCTCG
GAGAGGATCG CGGACGGCTA CGCCAAGCTC TCCAAAGTGC CCTATGATCC AAAGGCGCAA
TACCCCGAAC TCCTGAAAGT GCTGACGGAC AAGGGCGGAA CGTGA
 
Protein sequence
MKLAFIGFGE AAQAMALGFK AERSLERLSV YDIRSNDPAQ APVLEAKAAE LDVFLAPSAA 
EAINESPIVL SLVQGSVAVK VAESVAPLLA EGQIYIDLNS VSPDTKRRVA DVIAGGGRGD
CVEGAIMDAV RPKNHKVPIL LAGPRAGEAA DKLNAAGMNS EAIGENIGQA CAVKMIRSVM
MKGVEALILE SMVAAETAGV TERILDSVNT TFKGLDWRQL TSHYLKRTHE HGARRVSEMK
ESAATVKGLG LEPYMSTAIS ERIADGYAKL SKVPYDPKAQ YPELLKVLTD KGGT