| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1359 |
|---|
| Symbol | |
|---|
| ID | 5192875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1528057 |
|---|
| End bp | 1528947 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640585824 |
|---|
| Product | 6-phosphogluconate dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001266701 |
|---|
| Protein GI | 148546599 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.234079 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.110922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCA AAACTTTAGG TTTGATCGGA TTTGGAGAAG TCGGCGGAAT ATTAGCGACT
GAATTGTCCA ATCAAGGTGT GAACATTAAG ATTTACGACA AGTTGATGAA AAGAGCCTCA
AGCCGAAGTG CACTTACTGC TAAGGCCCAG CACTTAAATG TTGAACTGTG TGAGTCTGCC
ATAGACGCTG CCGCAGGTGC TCAGCTCATT ATTTCCGCAG TGACAGCCGG ATCTGCTCTA
GAGGCCGCAG TAAAGCTTTT CCCACATCTA CACCCTGGCC AAATATTCAT GGATCTAAAC
TCGGTGTCAC CTGCAACAAA GCGTGCAGCC TATGAAGCCG CTTCACGATA TGGCGTAGAG
TATATCGATG CCGCTGTGAT GGCTCCAGTC CCTCCCAAGC GACTCCAAAC GCCGATCTTG
TTAGGTGGCG CTCAAGCGCT CAAGCTCAAG AAAGCCCTCG AAGAACTTGG CTTCAATGTA
CGAACAGTGG CTAACACAAT TGGGGTAGCC TCTGCTATCA AAATGTGCAG AAGCATAATC
ATCAAGGGCC TGGAAGCTCT GACTACAGAA TGCATGTCTA CTGCAAGGCA GTATGGGGCA
GAAGAGATAG TTCTAGCCTC ACTTCATGAA AGCTTCCCTA GCTTGGGTTG GAATAAAGAA
CTCCCTCATT ATCTCATCAG CCGTGTCGCA GAGCATGGGC TAAGACGTGC TGAGGAAATG
GACGAAGTGG CCAGAACCTT ATCTGAAGTG GGTATTGCCC CGGAAATGAC CCTAGCTATT
GCTGCCACAC AACGCGCCTT TGCTGACGCA TTAAGCTCGA AAGGTATTGG GTATGCCACC
TTAGAGCCCT TTGACTGGAT GCTGGCGGTC GATAAGATCT ACAGTTCCTA A
|
|---|
| Protein sequence | MEIKTLGLIG FGEVGGILAT ELSNQGVNIK IYDKLMKRAS SRSALTAKAQ HLNVELCESA
IDAAAGAQLI ISAVTAGSAL EAAVKLFPHL HPGQIFMDLN SVSPATKRAA YEAASRYGVE
YIDAAVMAPV PPKRLQTPIL LGGAQALKLK KALEELGFNV RTVANTIGVA SAIKMCRSII
IKGLEALTTE CMSTARQYGA EEIVLASLHE SFPSLGWNKE LPHYLISRVA EHGLRRAEEM
DEVARTLSEV GIAPEMTLAI AATQRAFADA LSSKGIGYAT LEPFDWMLAV DKIYSS
|
|---|
| |