27 homologs were found in PanDaTox collection
for query gene BBta_4160 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_4160  hypothetical protein  100 
 
 		 272 aa  537  9.999999999999999e-153  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.911147 
 
 
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NC_011371  Rleg2_6367  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  51.34 
 
 		 288 aa  251  7e-66  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.707828  normal  0.820897 
 
 
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NC_012852  Rleg_6188  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  52.11 
 
 		 282 aa  243  1.9999999999999999e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.465928  normal  0.388125 
 
 
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NC_010505  Mrad2831_1794  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  53.6 
 
 		 280 aa  184  2.0000000000000003e-45  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0510209 
 
 
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NC_006670  CNA01130  conserved hypothetical protein  40.71 
 
 		 316 aa  171  2e-41  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.174189  n/a   
 
 
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NC_007413  Ava_4075  6-phosphogluconate dehydrogenase, NAD-binding  38.22 
 
 		 299 aa  149  4e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.546108 
 
 
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NC_009921  Franean1_2354  putative dehydrogenase  39.45 
 
 		 291 aa  141  9.999999999999999e-33  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0342021 
 
 
-
 
NC_007777  Francci3_1825  hypothetical protein  32.05 
 
 		 284 aa  74.7  0.000000000002  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007794  Saro_2815  6-phosphogluconate dehydrogenase, NAD-binding  32.5 
 
 		 277 aa  60.8  0.00000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.256633  n/a   
 
 
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NC_011138  MADE_01512  3-hydroxyisobutyrate dehydrogenase  26.92 
 
 		 291 aa  60.1  0.00000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
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NC_009832  Spro_2089  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  29.44 
 
 		 295 aa  58.2  0.0000001  Serratia proteamaculans 568  Bacteria  normal  0.891235  normal  1 
 
 
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NC_009512  Pput_1359  6-phosphogluconate dehydrogenase, NAD-binding  26.97 
 
 		 296 aa  52  0.000009  Pseudomonas putida F1  Bacteria  normal  0.234079  normal  0.110922 
 
 
-
 
NC_008254  Meso_1079  6-phosphogluconate dehydrogenase, NAD-binding  26.54 
 
 		 300 aa  51.2  0.00002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
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NC_007778  RPB_0875  6-phosphogluconate dehydrogenase, NAD-binding  27.06 
 
 		 309 aa  50.4  0.00003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.651472  normal  0.39983 
 
 
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NC_014210  Ndas_1131  Dimethylmenaquinone methyltransferase  32.69 
 
 		 450 aa  50.1  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
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NC_013730  Slin_4024  6-phosphogluconate dehydrogenase NAD-binding protein  27.35 
 
 		 263 aa  49.3  0.00007  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  0.0632878 
 
 
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NC_008781  Pnap_2165  6-phosphogluconate dehydrogenase, NAD-binding  25.95 
 
 		 299 aa  48.5  0.0001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal  0.0994663 
 
 
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NC_010501  PputW619_1455  phosphogluconate dehydrogenase, NAD-binding, putative-like protein  28.18 
 
 		 298 aa  47.4  0.0002  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_2699  dehydrogenase  27.47 
 
 		 312 aa  47.4  0.0003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.647846  normal  0.600019 
 
 
-
 
NC_008254  Meso_1049  6-phosphogluconate dehydrogenase, NAD-binding  28.11 
 
 		 294 aa  47.4  0.0003  Chelativorans sp. BNC1  Bacteria  normal  0.0780774  n/a   
 
 
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NC_011892  Mnod_8322  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  30.67 
 
 		 304 aa  47  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0469353  n/a   
 
 
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NC_008148  Rxyl_0198  6-phosphogluconate dehydrogenase, NAD-binding protein  30.37 
 
 		 261 aa  45.8  0.0007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C6789  beta-hydroxyacid dehydrogenase  28.12 
 
 		 287 aa  44.3  0.002  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
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NC_010524  Lcho_3634  phosphogluconate dehydrogenase, NAD-binding,-like protein  26.46 
 
 		 313 aa  43.9  0.003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.75811 
 
 
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NC_012792  Vapar_5740  Phosphogluconate dehydrogenase, NAD-binding, putative-like protein  27.32 
 
 		 301 aa  43.1  0.005  Variovorax paradoxus S110  Bacteria  normal  0.659534  n/a   
 
 
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NC_012803  Mlut_01370  3-hydroxyisobutyrate dehydrogenase  26.83 
 
 		 301 aa  42.4  0.008  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_013946  Mrub_2676  Phosphogluconate dehydrogenase NAD-binding, putative  25.37 
 
 		 262 aa  42.4  0.009  Meiothermus ruber DSM 1279  Bacteria  normal  0.607685  normal  0.076232 
 
 
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