| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1825 |
|---|
| Symbol | |
|---|
| ID | 3906216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 2162861 |
|---|
| End bp | 2163715 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637879163 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_480930 |
|---|
| Protein GI | 86740530 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCCCC GCCGGATTGG GCTGCTACAC CCGGGGAGCA TGGGCGCGCG GATCGGCGAG
ATCTTGCGGA CCGCAGGGCA CGAGGTGCTG TACTGCCCCA CGGGACGAAG CCCGCAGACG
TTGCAACGGG CCCAGGATGC CGGCCTGCTG CCCGTCAGCC GCCTGGACGA CCTCTGCGAC
AGCACCGAGA TCCTGATGTC GTTGTGTCCA CCGGAGGCCG CGCTTGACGT GGCACGGGCG
GTGGCCGCGG CGGGGTTTAC GGGTCTGTAC GTAGACGCCA ATGCCGTCAA CCCGGAACGT
ATGCGCGCCA TCGAGCGGCT CATGACCGCT GCGGGCGGCA CCATCGTTGA TGCTTGCCTC
ATCGGCCCGG TCCCGACACG GCAGGACACC ACACGCATGT ACCTGGCCGG GGATGCCCGC
CACGCCGGCG AGATCTCCGG GCTGTTCACC GGATCAACCG TGCAGGTCAT CGTGTTCGAC
GGCCAGGTGG GCGCAGCGTC CGCCTTGAAG ATCGCCCACT CGTCGTTCGC GAAGACGTCG
CGGGTTCTCG CCGCGCTCGC GCACGCACTG GCCGCCGAAT ACGGCGTCCA GCAAGCGCTC
ACCGACGAGG CCCGCAGACG AAGCCGACCG GCGCTCGCCG AACCAGACTT CTTCGCCACT
GTCGCGGCCC GCGCTTGGCG GTGGGGACCC GAACTCGCCC AAGCGGCCGA GAGCTACCGG
ACCGTCGGAC TGCCGGACGC GATGCTCCGC GGAGCGGAAG AACTCCTCCG CACCTGGTAC
GAGCATAAAG ACATCGAGCA CGCCCCGCTC AACCTGCTTC TCCGCGAGCT GCACTCTGGT
CAGGACGGCG GGTAA
|
|---|
| Protein sequence | MTPRRIGLLH PGSMGARIGE ILRTAGHEVL YCPTGRSPQT LQRAQDAGLL PVSRLDDLCD
STEILMSLCP PEAALDVARA VAAAGFTGLY VDANAVNPER MRAIERLMTA AGGTIVDACL
IGPVPTRQDT TRMYLAGDAR HAGEISGLFT GSTVQVIVFD GQVGAASALK IAHSSFAKTS
RVLAALAHAL AAEYGVQQAL TDEARRRSRP ALAEPDFFAT VAARAWRWGP ELAQAAESYR
TVGLPDAMLR GAEELLRTWY EHKDIEHAPL NLLLRELHSG QDGG
|
|---|
| |