Gene Meso_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1079 
Symbol 
ID4180359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1182998 
End bp1183900 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content65% 
IMG OID638066960 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_673641 
Protein GI110633433 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACA TCGCTTTCAT CGGCTTCGGC GAAGCCGCGC AGGCCATGGC AATGGGCCTG 
AGCAAGGAGC CCTCGGTGGA AGGGCTTTCC GCCTTCGACC TCCGTTTCGC GGATGCCGCT
CAAGCGCCTG ATCTCAAGAG CCGGGCGGAG GCGCGGAAAG TAAAGGCCTG CACCAGCCTG
GTAGAGGCGG TCGCGGGTGC GGACGTCGTG CTCTCCCTCG TAGTGGGGTC GGCGGCGGTT
AAAGTGGGAG AGGATGCGGG CAAGCATCTG AGGAAGGGAC AGGTCTTCAT CGACCTTAAC
TCCATCGGGC CGGACGCCAA GAAGAGGGTG GGCGAGGCGC TGGCCAGGGG AGGCGATGCG
GACTTCGTCG AAGGCGCCGT CATGGCGCGC GTGCCGCCTT ACGAGCACAA GGTGCCGATC
CTCCTGGCCG GAGGGGAGGC GGAGCGCGCG GCAAGGATCC TGACCGGCGC GGGAATGGAT
ATCGAGGCTG TCGGGACCGA GATCGGCCAA GCTTGTGCGG TGAAGATGAT CCGCTCAATC
CTCGTGAAGG GCATCGAGGC GCTCCTGCTC GAAAGTCTTA CCGCGGCGGA GAAAGCGGGG
GTGCGCGAGC GCATAATCGA TTCGATCTCG CAGACCTTTC CCGGGCTCGA CTGGCGGCAG
ACGGCCACCT ATTACATCGG CCGCACGCAG CAGCACGGCG CCCGCCGGGT GACGGAGATG
AAGGAAGCCG CCGCCACTCT CGAAAGCCTT GGGCTCAAGC CCATTTTGTC GACCGCGATC
GCGCAGACGA TCGGCGGCTC GTATGAAAAG CTCAAGGCGT CGGGCCTCCC GTTCGATAAG
GAGTATCCGG AGATGTTGGC CGCGCTTGCG GCAGGCGGCA ATGCGGGAGA GAAGGCGGCA
TGA
 
Protein sequence
MTNIAFIGFG EAAQAMAMGL SKEPSVEGLS AFDLRFADAA QAPDLKSRAE ARKVKACTSL 
VEAVAGADVV LSLVVGSAAV KVGEDAGKHL RKGQVFIDLN SIGPDAKKRV GEALARGGDA
DFVEGAVMAR VPPYEHKVPI LLAGGEAERA ARILTGAGMD IEAVGTEIGQ ACAVKMIRSI
LVKGIEALLL ESLTAAEKAG VRERIIDSIS QTFPGLDWRQ TATYYIGRTQ QHGARRVTEM
KEAAATLESL GLKPILSTAI AQTIGGSYEK LKASGLPFDK EYPEMLAALA AGGNAGEKAA