Gene Rxyl_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0198 
Symbol 
ID4117903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp199713 
End bp200498 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content77% 
IMG OID638034989 
Product6-phosphogluconate dehydrogenase, NAD-binding protein 
Protein accessionYP_642988 
Protein GI108803051 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR00581] molybdenum cofactor biosynthesis protein MoaC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGGG GAGGGCACCT CGCCGTGCTG GGCCTGGGCG AGGCGGGGAG CGAGATCTCG 
GCGGACCTCG CCGCCCGCGG GAGGAGGGTG CTCGGCTACG ACATAAGGCC GGTGGAGCCG
CCGGAGGGGG TCGAGCTCGC CGGCTCCCCG GAGGAGGCGG CGCGCGGGGC CGACGCCGTC
CTGGCGCTCG TCCCCGCCGC CGACGCGCCG GCGGCGGCCC GGTCGGTGCT CCCCGTCCTG
GGTCCCGGCT CGCTCTACGC CGACTGCAGC AGCGCGAGCC CCCGGCAGAA GCGCGAGCTC
GCCCGCATGG TCGGGAGGAC GGGCGCGAGC TTCGTCGACC TCACCCTCAT GGGCACCGTG
CCGGGGAGGG GCCTCTCCAC CCCCGCCTTC GTCTCCGGGG AGGGTGCCGG CCGCCTCGCC
GACCTCCTGC GCCCCCTCGG CATGCCGGTC GAGGAGGTCT CCGGCGAGCC CGGGGACGCC
GCCGGGCGCA AGCTGCTCAG GAGCGTCTTC GTCAAGGGGA TGACCGGGGC CATGATGGAG
GCGCTCGAGG CCGCGCGGGC GGCGGGCTGC GAGGGGTGGC TGTGGGGCAA TATCGTCTCC
GAGCTTGCGG GGGCCGACGA GGCGCTCGCG CGCAGGCTCG TCGAGGGCAG CTACAGGCAC
GCCCGGCGCC GGGCCGACGA GATGGCCGCC GCGGCGGAGC TCCTGCGAGG CCTCGGCGTC
GAGCCGCGCA TCACCCGGGC GGCCGAGGCC CGGCTCCGGG AACTGCTGGA GGGCGGGGAG
GCGTAG
 
Protein sequence
MSGGGHLAVL GLGEAGSEIS ADLAARGRRV LGYDIRPVEP PEGVELAGSP EEAARGADAV 
LALVPAADAP AAARSVLPVL GPGSLYADCS SASPRQKREL ARMVGRTGAS FVDLTLMGTV
PGRGLSTPAF VSGEGAGRLA DLLRPLGMPV EEVSGEPGDA AGRKLLRSVF VKGMTGAMME
ALEAARAAGC EGWLWGNIVS ELAGADEALA RRLVEGSYRH ARRRADEMAA AAELLRGLGV
EPRITRAAEA RLRELLEGGE A