Gene BBta_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4160 
Symbol 
ID5149194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4370506 
End bp4371324 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content69% 
IMG OID640558989 
Producthypothetical protein 
Protein accessionYP_001240127 
Protein GI148255542 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.911147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGCG CCATCGCCAC CCGCCTCGTG GAGCATGGCT GCAAGGTCCT GACCCTGCTC 
AAAGGGCGAA GTGCCGCCAC GCAGGCGAGG GCCGCGGCGG CCGGCATGAC CGGAGCCAGC
GAGGCCGAGA TCGCCAATGC GGATATCATC CTGTCGATCG TGCCGCCGGG CGAGGCGGTG
GCACTGGCGG AGCAGCTCGC GACGCTCATC AATCGCAATG CGAAGAAGCC GGTCGTGGTC
GACTGCAACG CCGTGAACGT CGAGACCATC CGGACGATCG AGGACATCGT GCTGTCGTCG
GGCGCGCGCC TCGTCGATGC CGCCATCATC GGCCTGCCGC CGAAGCCGGG AACGAAAGGA
CCGGCGTTCT ATGTGAGCGG CGACGCCGCT GGCGACATCG CCGTGCTGGG CCAGCTCGGG
CTCGACCTGC GGCTGATCGA AGGACCGATC GGCGCGGCCT CGGCGTTGAA GATGTCCTAT
GCCGGCATCA ACAAGGGCCT GACGGGGCTC GGCGCGGCCA TGGTGCTCGC GGCCACGCGC
GCCGGCGCCG CCGACGCGCT GCGCGATGAA CTCGCGCTCA GCCTGCCGCA GGTCCAGGCG
CGGCTCGCCA ACGCGCTGCC GGACATGCTG CCAAAGGCCT ATCGCTGGGT CGCCGAGATG
CGCGAGATCG CGGGCTTCCT CGGCGAGGAT CATCCGGCCG CGCTGATCTA TGAAGGCTTT
GCCCGGCTGT TCGAGCACAT CGCCGCGGAT GTGCAGGGGC AGGGCACCGA GGCGGCGCAA
CTCGTGGCCT TCGCCGAGCG GTGCAAGGCG AAGACGTAG
 
Protein sequence
MGSAIATRLV EHGCKVLTLL KGRSAATQAR AAAAGMTGAS EAEIANADII LSIVPPGEAV 
ALAEQLATLI NRNAKKPVVV DCNAVNVETI RTIEDIVLSS GARLVDAAII GLPPKPGTKG
PAFYVSGDAA GDIAVLGQLG LDLRLIEGPI GAASALKMSY AGINKGLTGL GAAMVLAATR
AGAADALRDE LALSLPQVQA RLANALPDML PKAYRWVAEM REIAGFLGED HPAALIYEGF
ARLFEHIAAD VQGQGTEAAQ LVAFAERCKA KT