Gene Slin_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4024 
Symbol 
ID8727782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4833745 
End bp4834536 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID 
Product6-phosphogluconate dehydrogenase NAD-binding protein 
Protein accessionYP_003388813 
Protein GI284038883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0632878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGGGA ATAACCAAAT GAAAATCGCA CTACTTGGGC TGGGAGAAGC GGGGAGTAGT 
TTCGCTAATG ACTTAGCCAG CCTGGGCGTA ACCGTTGTCG GCTATGACCC GGCTCTTAAA
CGGGATTTAT CACCGGCCGT AACCCTGGCC TACAGCAATG CAGAAGCGGT CCTGAACGCC
GATGTAATTC TAAGCGTCAA CCTTTCGGCA GTGGCGGAAA CCATTGCGGC CGAGGTGTTG
CCGGTTCTTC GACCGGGGCA ATTGTATGCC GAAATGAACA CCGCTTCGCC CGACACCAAA
CGCCGGGTCG AAGCCATCAT CAGCCCCTCC GGCGCTCAGG TTGTGGATGT TGCCATCATG
GCACCCGTAC CCCCCAAAGG CATTTTAACG CCGTTTCTGG TGTCAGGTCC CGGTGCCGAT
CGGTTTGCGG AACTACTGCT TCCATTGGGA ATGAACATAA GCGTGGTAAG CGACCAGACG
GGCGAGGCCG CCACCCGAAA GCTGCTCCGG TCCATTGTGT ACAAGGGCAT TGCCGCCGTC
ATTGGCGAAG CTGTAGACGC CGGTCGCTCG TTTGGGCTGG AGCCGTACAT TCGGGAGCAG
ATTCTGTCTG TAGTCGGTGG CAACGACGCC TTGATCGACC GTTTTCTGGA AGGCAGCAAA
ACCCACGCCC TCCGCCGAAG TCATGAGCTC GAAGCCGTTG TTGCCATGCT CGGCGCACAG
CATGTTGAGC CGGTGATGTC GCGGGCCACC CTGACCAGCC TTGAGAATCT GATTGAACGC
ACTCAGCCAT AA
 
Protein sequence
MGGNNQMKIA LLGLGEAGSS FANDLASLGV TVVGYDPALK RDLSPAVTLA YSNAEAVLNA 
DVILSVNLSA VAETIAAEVL PVLRPGQLYA EMNTASPDTK RRVEAIISPS GAQVVDVAIM
APVPPKGILT PFLVSGPGAD RFAELLLPLG MNISVVSDQT GEAATRKLLR SIVYKGIAAV
IGEAVDAGRS FGLEPYIREQ ILSVVGGNDA LIDRFLEGSK THALRRSHEL EAVVAMLGAQ
HVEPVMSRAT LTSLENLIER TQP