Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4024 |
Symbol | |
ID | 8727782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4833745 |
End bp | 4834536 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | 6-phosphogluconate dehydrogenase NAD-binding protein |
Protein accession | YP_003388813 |
Protein GI | 284038883 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0632878 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGGA ATAACCAAAT GAAAATCGCA CTACTTGGGC TGGGAGAAGC GGGGAGTAGT TTCGCTAATG ACTTAGCCAG CCTGGGCGTA ACCGTTGTCG GCTATGACCC GGCTCTTAAA CGGGATTTAT CACCGGCCGT AACCCTGGCC TACAGCAATG CAGAAGCGGT CCTGAACGCC GATGTAATTC TAAGCGTCAA CCTTTCGGCA GTGGCGGAAA CCATTGCGGC CGAGGTGTTG CCGGTTCTTC GACCGGGGCA ATTGTATGCC GAAATGAACA CCGCTTCGCC CGACACCAAA CGCCGGGTCG AAGCCATCAT CAGCCCCTCC GGCGCTCAGG TTGTGGATGT TGCCATCATG GCACCCGTAC CCCCCAAAGG CATTTTAACG CCGTTTCTGG TGTCAGGTCC CGGTGCCGAT CGGTTTGCGG AACTACTGCT TCCATTGGGA ATGAACATAA GCGTGGTAAG CGACCAGACG GGCGAGGCCG CCACCCGAAA GCTGCTCCGG TCCATTGTGT ACAAGGGCAT TGCCGCCGTC ATTGGCGAAG CTGTAGACGC CGGTCGCTCG TTTGGGCTGG AGCCGTACAT TCGGGAGCAG ATTCTGTCTG TAGTCGGTGG CAACGACGCC TTGATCGACC GTTTTCTGGA AGGCAGCAAA ACCCACGCCC TCCGCCGAAG TCATGAGCTC GAAGCCGTTG TTGCCATGCT CGGCGCACAG CATGTTGAGC CGGTGATGTC GCGGGCCACC CTGACCAGCC TTGAGAATCT GATTGAACGC ACTCAGCCAT AA
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Protein sequence | MGGNNQMKIA LLGLGEAGSS FANDLASLGV TVVGYDPALK RDLSPAVTLA YSNAEAVLNA DVILSVNLSA VAETIAAEVL PVLRPGQLYA EMNTASPDTK RRVEAIISPS GAQVVDVAIM APVPPKGILT PFLVSGPGAD RFAELLLPLG MNISVVSDQT GEAATRKLLR SIVYKGIAAV IGEAVDAGRS FGLEPYIREQ ILSVVGGNDA LIDRFLEGSK THALRRSHEL EAVVAMLGAQ HVEPVMSRAT LTSLENLIER TQP
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