Gene Smed_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2232 
Symbol 
ID5323093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2312675 
End bp2313541 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content63% 
IMG OID640791170 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001327899 
Protein GI150397432 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.670475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA TTTCAATTCT CGGCCTGGGC GCCATGGGGA CGGCGCTCGC ACAAACGCTT 
CTTAAGAACG GTCACACCGT CACGATCTGG AATCGAACGG GCCGCCGCGC CGAGCCGCTT
GCCGAGGCTG GCGCGAAAAT CGCGGAAAGT CCGGCCGAAG CGATCGCGGC GAGCGAGCTC
ACCATTCTCT GCGTCGTCGA CTATCCCGCC GCACGTGCGG TGCTGACGCA GGCGGAGGGC
GTCCTCGCCG GCCGCGACCT TCTCAACCTC ACCAACGGCA CACCGGGTGA CGCCAGGGAA
TTCGGCGCAT GGCTGGCGGC CAAGGGGGCG ACCTATCTCG ACGGCGGGAT CATGGCGATC
CCGCCGATGA TCGGCGAGGC TGGCGCCCTG ATTCTCTATA GCGGCTCGCC TACGCTCTTC
GAGCGGCACA GGAAAACGCT CGATGCGCTT GCCGAAAGCC GCCATCTCGG CGACGAAGTG
AGCCTCGCCT CACTCTACGA CTTGGCGCTG CTTTCGGGAA TGTACGGCCT CTTTTCGGGC
TTCCTGCATG CGAGCGCGTT GGTGACAAGC GCCGGAGGCA AAGCTGCCGA CTTCCTGCCG
CTGCTCCAAC CGTGGATCCA GGCGATGAGC GGCACCCTTC CCGACCTTGC CGACAAGGTC
GACAGCGATA TGCACGGCCG AAACGTCGTC TCCAATATCG CCATGCAGAA AGTCGCACTC
GAGAATATCG TAAGAGCGAG CGCAGAACAG GGCGTCGCTC CCGATTTCAT CGAACCCATG
TTGCGGCTGG CCGGCGGGCG CATCGACAAA GGCGGTCATG ATGAGGACAT TTCCGCCGTC
ATCGAGGAGA TCCGGCAACG AAAATGA
 
Protein sequence
MSSISILGLG AMGTALAQTL LKNGHTVTIW NRTGRRAEPL AEAGAKIAES PAEAIAASEL 
TILCVVDYPA ARAVLTQAEG VLAGRDLLNL TNGTPGDARE FGAWLAAKGA TYLDGGIMAI
PPMIGEAGAL ILYSGSPTLF ERHRKTLDAL AESRHLGDEV SLASLYDLAL LSGMYGLFSG
FLHASALVTS AGGKAADFLP LLQPWIQAMS GTLPDLADKV DSDMHGRNVV SNIAMQKVAL
ENIVRASAEQ GVAPDFIEPM LRLAGGRIDK GGHDEDISAV IEEIRQRK