Gene Daci_4431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4431 
Symbol 
ID5750019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4852652 
End bp4853512 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content71% 
IMG OID641299533 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001565446 
Protein GI160899864 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.182897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.586464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCG CCTGCTACAT GCAGGCCTTT GTGGAGCAGG GGCACAGCCT GGTGGGCCTG 
TGCGACCTGC AGCCCAACGC TGCGGTGGCC GACGCCGTGC AGGCCGCTGG TGCGCAGGTG
CATACCGCGC CCGGTGCCTG GCTGGCCGAG GCCGACGTGG TGGTGAGCGC CGTGTTCGGC
ACCGTGGCGC GCAGCCTGTT CGAGGCCTGC CTGCCCCATC TGCGCCATCT GCGCGAGGGC
GTGGTCTATG TGGACATGAC CACGGCCGAC CCGCAGGAGA TGCGCGAATG CGGCGAGCTG
GCCCGGCGCG TCGCCCAGGG CAGGGCGGTG CACTTCGTGG ACGTGGCCAT CACCGGCGCG
GTCAACCTGG GCGGCAGGAA GACGCCGCTG CTCGTGGCCG GTGGCAAGGC CGGTTTTGTA
CAGGAATTGT TCTTGCCCTT TGGCGGCTCG GTTCGCGTGG TGGGCGGACA GCCGGGCGAT
GCTGCCGCGC TCAAGCTCCT GCGCAGCATC TACACCAAGG GGACCGAGGC GCTGGCCGTG
GAGTGCCTGG TGACGGCCCA GCAGATGGGC CTGCGCGAGC AGCTGCATGC CGTGCTGCAG
GACATCGACG AGACACCGCT GCGCACGCTG ATGGAGTCCA TGGTGCGCAC GCACATCCCG
CATTCCGCAC GCCGCCGCAA CGAGGTGGCC GAGGCCCGGC AGCAGATGGC CCGCAACGGC
CTGTCGCCCA TCGCCTCGCC CGCCGTCGAG GCGCTGTTCG CCGCCACGGC CCGGGCGCAT
GCGGCCCAAC CGTTCACCGG CACCTCCACC GACGAGGCCA TCGATTGGCT GGGCAGCCAC
GTGCTCGCCA GCCAAGCCTG A
 
Protein sequence
MVGACYMQAF VEQGHSLVGL CDLQPNAAVA DAVQAAGAQV HTAPGAWLAE ADVVVSAVFG 
TVARSLFEAC LPHLRHLREG VVYVDMTTAD PQEMRECGEL ARRVAQGRAV HFVDVAITGA
VNLGGRKTPL LVAGGKAGFV QELFLPFGGS VRVVGGQPGD AAALKLLRSI YTKGTEALAV
ECLVTAQQMG LREQLHAVLQ DIDETPLRTL MESMVRTHIP HSARRRNEVA EARQQMARNG
LSPIASPAVE ALFAATARAH AAQPFTGTST DEAIDWLGSH VLASQA