| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_3831 |
|---|
| Symbol | |
|---|
| ID | 5356054 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 3966582 |
|---|
| End bp | 3967472 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640812881 |
|---|
| Product | 2-hydroxy-3-oxopropionate reductase |
|---|
| Protein accession | YP_001349185 |
|---|
| Protein GI | 152988500 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA TCGGATTCAT CGGCACCGGA ATCATGGGCA AGCCCATGGC GCAGAACCTG
CAGAAGGCCG GCCACAGCCT GTTCCTTTCC ACCCACCACG ACGCCGCTCC GGCCGACCTG
CTGGAGGCCG GCGCCATTGC CCTGGCCAAC CCGAAGGAAG TGGCCCAGGA AGCCGAGTTC
ATCATCGTCA TGGTGCCGGA CACCCCGCAG GTCGAGGACG TGCTGTTCCG CAAGGACGGC
ATCGCCGAAG GCGTCGGCCC GAACAAGGTG GTGATCGACA TGAGTTCGAT CTCCCCCACC
GCCACCAAGG GCTTCGCCGA GAAGATCAAG GCCACCGGCG CGCAGTACCT GGACGCCCCG
GTCTCCGGCG GCGAGGTCGG CGCCAAGGCG GCGACCCTGA GCATCATGGT CGGCGGCTGC
CCGAACACCT TCGAACGCGC CCTGCCGCTG TTCCAGGCGA TGGGCAAGAA CATCACCCGC
GTCGGCGGCA ACGGCGACGG CCAGACCGCC AAGGTGGCCA ACCAGATCAT CGTCGCGCTG
AACATCCAGG CGGTCGCCGA GGCCCTGCTG TTCGCCGCCC GCAACGGCGC CGACCCGGCC
AAGGTGCGCG AGGCGCTGAT GGGTGGCTTC GCCTCCTCGC GGATCCTCGA GGTGCACGGC
GAGCGCATGG TCAAGGGCAC CTTCGACCCG GGCTTCCGCA TCAGCCTGCA CCAGAAGGAC
CTCAACCTGG CCCTGGCCGG CGCCCGCGAG CTGAACCTGA ACCTGCCCAA CACCGCCAAC
GCCCAGCAGG TGTTCAGCAC CTGCGCGGCC ATCGGCGGCA GCAACTGGGA CCACTCGGCG
CTGATCAAGG GCCTGGAACA CATGGCCAAC TTCTCGATCC GCGACGAGTG A
|
|---|
| Protein sequence | MAKIGFIGTG IMGKPMAQNL QKAGHSLFLS THHDAAPADL LEAGAIALAN PKEVAQEAEF
IIVMVPDTPQ VEDVLFRKDG IAEGVGPNKV VIDMSSISPT ATKGFAEKIK ATGAQYLDAP
VSGGEVGAKA ATLSIMVGGC PNTFERALPL FQAMGKNITR VGGNGDGQTA KVANQIIVAL
NIQAVAEALL FAARNGADPA KVREALMGGF ASSRILEVHG ERMVKGTFDP GFRISLHQKD
LNLALAGARE LNLNLPNTAN AQQVFSTCAA IGGSNWDHSA LIKGLEHMAN FSIRDE
|
|---|
| |