| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_9609 |
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| Symbol | mmsB |
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| ID | 7381949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011991 |
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| Strand | - |
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| Start bp | 77770 |
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| End bp | 78636 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643653284 |
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| Product | 3-hydroxyisobutyrate dehydrogenase |
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| Protein accession | YP_002551455 |
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| Protein GI | 222109190 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACGGAAC GTCCGAGAAT TGGATTGGTC GGCGTCGGAA AAATGGGCCG GGCACTTGCG
ACACGCTTGT TGTCTTGTGG CGTTGAGGTA TTCGGTTGCG ATCCCGCAGC CCAGAATCCA
CCGGACGGCT TGCAGTTTGT CGCAACGCCA CGGCAACTGG CTGACTGCTG CGATGTGGTC
ATGGGCTGCG TGAGCGGACA AGAGGCATTT CGCGAGGTCA CTCTTGGCCC CAATGGAATT
CGAGGCGGCA CGCGCGTTCA TACCTATGCT AATGTTGGAA CAACTGGCCC TTCATTGGTC
AAGGAGATTG CACACGGACT AGCGGAAGTT GACATCCGCA CTATTGATGT GCCGATGACA
GGAGGCCCTC GCCGCGCGGC AAGAGGTGAG GTCACCGTCA TCGCAAGTGG CCCTCTTAAA
GTGCTCCAAG CGGTCAGTCC GACCCTTGAA AAGTACAGCT CCAAAATCGT TTACGTCGGC
CCGGGCGTCG GTCAGGCACA ATATGTTAAG GTGATCAACA ACCTCGTGAC CGCTGGAAAC
CTCGCAGTCG CCATTGAGGC TTTAACGCTG GCAAAGAAGG CGACAATCTC GCGAGAGCTA
TTGCTCGAAG TGATCAACTC GGGATCTGCA GCAAGCGACG TCAGTACTTC CAAAATCCCC
TCCCATGTTC TGACGCGAAC ATTTGATTTT GGGGCCTCAC TTGCCTTGGT TGATCATGAT
CTATCATGTT GTCTCCACGA GGCACGGTTA ATTGATTGCG AAATGCGCGT CTCCAAGGCC
GTCCTCGATG TTTATCGGAG CGCGATTGAG GCTGGGAGTG CTCTCGACGA TATTACGACG
TTAGCTGTTT ATTTGGAGAA CCGATAG
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| Protein sequence | MTERPRIGLV GVGKMGRALA TRLLSCGVEV FGCDPAAQNP PDGLQFVATP RQLADCCDVV
MGCVSGQEAF REVTLGPNGI RGGTRVHTYA NVGTTGPSLV KEIAHGLAEV DIRTIDVPMT
GGPRRAARGE VTVIASGPLK VLQAVSPTLE KYSSKIVYVG PGVGQAQYVK VINNLVTAGN
LAVAIEALTL AKKATISREL LLEVINSGSA ASDVSTSKIP SHVLTRTFDF GASLALVDHD
LSCCLHEARL IDCEMRVSKA VLDVYRSAIE AGSALDDITT LAVYLENR
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