| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4270 |
|---|
| Symbol | |
|---|
| ID | 5319032 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009620 |
|---|
| Strand | - |
|---|
| Start bp | 759595 |
|---|
| End bp | 760482 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640776075 |
|---|
| Product | 3-hydroxyisobutyrate dehydrogenase |
|---|
| Protein accession | YP_001313008 |
|---|
| Protein GI | 150376412 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGAT CGAACATAGG CTTCATCGGA CTCGGCCTGA TGGGCCAGGG CATGGCGGCC
AATATTCTGA AAAAGGGCTG GCCGCTTTTC GTTATGGCGC ATCGCAACCG CGCGCCGGTC
GAGGCGCTTG TCGCCGAAGG CGCCAAAGAG GCGAAGTCAC CGCGTGAGAT GGCGGAACAC
TGTGACATCA TCGTCCTTTG CGTCACCGGC TCGCCGGAAG TTCTCTCCGT CATGGGAGGT
CCCGACGGCA TCGCCAGCGC CGGCAGGCCG GTGACCATTA TCGACTGCTC GACATCCGAC
CCTTCCGTCA CGACGAAGCT GGCGGCCGAT GTCGCCGAAA GCGGCCTCAC GCTCATCGAT
GCGCCGCTTA GCCGGACCCC GGCAGATGCG GCCGCGGGCA CGCTCGACGT GATGGTCGGC
GGTGCCGAAA ACGACGTCCA GCGCATCTGG CCCGTACTCG AATGCTTTGC GGGCCGCATC
ATCCACACCG GGCCGACTGG CTCCGGTCAC ACCATGAAGC TGCTCAACAA CTTTGTCTCG
ATGGGCTACG CTGCTCTTTA TTCCGAAGCG CTCATGCTCG GGCGCAAGGC AGGGCTCACG
CCCGAGGTTT TCGACAGCGT CATCCGCGGA GGCCGGATGG ATTGCCCCTT CTACCAGACC
TTCTTCCGCT GGGTTCTGGA ACGCGACCCG AACGCCCACA AGTTCGCGAT CCGCAACGCC
TTCAAGGACA TGAGCTATCT CGCCGGCTAT GCGAATGCGG CCGGCATTGC CAATCCGATC
GGGGCGGCCG TCCGGAATTC CTTTGCCCAG GCCGTCGGCG CAGGCCGCGG CGAGGACTAC
GTGCCGATGC TGTCGGATTT CATCGCGAAG TCGAACGGTC TGGAGTGA
|
|---|
| Protein sequence | MTRSNIGFIG LGLMGQGMAA NILKKGWPLF VMAHRNRAPV EALVAEGAKE AKSPREMAEH
CDIIVLCVTG SPEVLSVMGG PDGIASAGRP VTIIDCSTSD PSVTTKLAAD VAESGLTLID
APLSRTPADA AAGTLDVMVG GAENDVQRIW PVLECFAGRI IHTGPTGSGH TMKLLNNFVS
MGYAALYSEA LMLGRKAGLT PEVFDSVIRG GRMDCPFYQT FFRWVLERDP NAHKFAIRNA
FKDMSYLAGY ANAAGIANPI GAAVRNSFAQ AVGAGRGEDY VPMLSDFIAK SNGLE
|
|---|
| |