| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_2017 |
|---|
| Symbol | |
|---|
| ID | 4691299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | + |
|---|
| Start bp | 2292525 |
|---|
| End bp | 2293583 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639849783 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_996787 |
|---|
| Protein GI | 121608980 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.451307 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCAC TCAAAGTGGC CGTGATCGGC GACCAGTTCA TGAAAGCGCG CTACTTCACC
GAGGCGCTAC AGGCCGCGCT GCCGCAAACG GCGCTGGACA TCCGCACGCT GGAGCTCGAC
TGGCCCGACA CGCCGATGGC GCATGGCTAC GGCGCCGATG CCGGCGACCC GCAGTTGCAG
GGCCTCAAGG AATACATGGG CGCGCCCGGC GCGATGGCCG CCTTCATCGC TGACGCCGAG
GTGCTGGTGA ACCATCTCGC GCCGGTCACC GACGGCATGT TGCAGCGCTG CGCGCAGTTG
AAACTGGTGG CCGTGTCGCG CGGCGGGCCG GTCAACATCG ACATGCAGGC CGCGCGGCGG
CGCGGCGTGC AAGTGGTCAA CGCGCCGGGC CGCAATGCCA GCGCGGTGGC CGAGTTCACC
ATCGGCATGA TCCTGGCGCA GACGCGGCTC ATCACCCTGG GCCATGTGGC GCTGATGCGC
GGCCAGTGGC GCGGCGACCT GTACCGCGCC GACCGCACCG GCGAAGAACT GTGCAACCAG
AGCGTGGGCC TGATCGGCTA CGGCCATATC GGCAGCCGTG TCACCAAGCT GCTGCGGCCC
TTTGGCTGCC GCATCCTGGT CAGCGACCCG TATGCGCAAC TGGACGCCGC CGACCGCGCC
GCAGGCGTCG CGCAGGTCGG CCTGGCCGCC TTGCTGGCGC AGTCCGACGT GGTGTCGCTG
CACGCGCGCG TGACGCCCGA GACCACCGGC TTCATCGACG CCGCCGCGTT CGCGCAAATG
AAGGACGGCG CTCATTTCAT CAACACCGCG CGCGGCCCGA TGGTCGACTA CGCCGCGCTG
TACGCCGCGC TGCAAAGCGG GCGGCTGCGC GGCGCCGCGC TGGAGACCTT CGGCGTCGAG
CCTTGCGACC CTGCCGACCC GCTGCTGCGC CACCCGAACG TGACGCTGAC ACCGCATATC
GCCGGCGCGT CGATCAAGAC CGTCAGGTAC GCCGCCGGCC TGTGCGCCGA AGAAGTCCGC
CGCTACCTGC AAGGCCAGGC CTTTGCCAAC CCCTGCTGA
|
|---|
| Protein sequence | MRALKVAVIG DQFMKARYFT EALQAALPQT ALDIRTLELD WPDTPMAHGY GADAGDPQLQ
GLKEYMGAPG AMAAFIADAE VLVNHLAPVT DGMLQRCAQL KLVAVSRGGP VNIDMQAARR
RGVQVVNAPG RNASAVAEFT IGMILAQTRL ITLGHVALMR GQWRGDLYRA DRTGEELCNQ
SVGLIGYGHI GSRVTKLLRP FGCRILVSDP YAQLDAADRA AGVAQVGLAA LLAQSDVVSL
HARVTPETTG FIDAAAFAQM KDGAHFINTA RGPMVDYAAL YAALQSGRLR GAALETFGVE
PCDPADPLLR HPNVTLTPHI AGASIKTVRY AAGLCAEEVR RYLQGQAFAN PC
|
|---|
| |