Gene Rpic_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3480 
Symbol 
ID6286262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3637540 
End bp3638454 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content65% 
IMG OID642627065 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_001901032 
Protein GI187930545 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCG CAACTCTGAA CCTCGGTTTC ATCGGCCTCG GCATCATGGG CGCCCCCATG 
GCAGGCCACC TGCGCGCAGC AGGCCACACG CTCTTCGTGC ACGACGTCAA CCCGGCACCC
GCCGCGCTGG TGGAAGCCGG CGTGACGGTC TGCACGAGCG CGGAAGAAGT CGCCAAGCGC
GCCGACATCA TCTTCATCAT GGTGCCGGAC ACCCCGCACG TTGAAGCCGT GCTGTTCAGC
GAGAAGGGCG TCGCCAAGGC GCTGAAGGAT GCCGGCAAGG ACGCTGCTGC CAGCAAGATC
GTCGTCGACA TGAGCTCGAT CTCGCCGATC GCGACGAAAG ACTTTGCAGC CCGCATCAAC
AAGACCGGCG CGCAGTACCT GGACGCTCCG GTGTCGGGCG GTGAAGTGGG CGCGAAGGCT
GCGTCGCTGA CGATCATGGT GGGCGGTGAG CAGGCTGCGT TCGACCGCGT TGCTCCGCTG
TTCAACCTGA TGGGCAAGAA CATCACGCTG GTCGGCGGCA ACGGTGACGG CCAGACCACC
AAGGTGGCCA ACCAGATCAT CGTGGCGCTG AACATCCAGG CCGTGTCCGA AGCGCTGCTG
TTTGCATCGA AGGCGGGTGC CGATCCCGCA AAGGTACGTC AGGCACTGAT GGGCGGCTTC
GCTGCGTCGC GCATTCTTGA AGTGCACGGC GAGCGCATGG TGAAGCGCAC GTTCGACCCG
GGCTTCCGCA TCGAGCTGCA CCAGAAGGAC TTGAACCTGG CCCTGCAGGG CGCCAAGACG
CTGGGCGTGG CCCTGCCGAA CACGGCCACC GCGCAGGAGC TGTTCAACAC CTGCGCCGCC
AACGGCATGG GCAAGCAAGA TCATTCGGCC TTGTGCCGCG CGATCGAGAT CATGTCGAAC
CACGACATCG CCTGA
 
Protein sequence
MATATLNLGF IGLGIMGAPM AGHLRAAGHT LFVHDVNPAP AALVEAGVTV CTSAEEVAKR 
ADIIFIMVPD TPHVEAVLFS EKGVAKALKD AGKDAAASKI VVDMSSISPI ATKDFAARIN
KTGAQYLDAP VSGGEVGAKA ASLTIMVGGE QAAFDRVAPL FNLMGKNITL VGGNGDGQTT
KVANQIIVAL NIQAVSEALL FASKAGADPA KVRQALMGGF AASRILEVHG ERMVKRTFDP
GFRIELHQKD LNLALQGAKT LGVALPNTAT AQELFNTCAA NGMGKQDHSA LCRAIEIMSN
HDIA