| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_0004 |
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| Symbol | |
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| ID | 5056433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 4325 |
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| End bp | 5197 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640472267 |
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| Product | 6-phosphogluconate dehydrogenase-like protein |
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| Protein accession | YP_001156867 |
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| Protein GI | 145592570 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000473013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00414956 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTCG GCCTGGTAGG GCTCGGCCGC ATGGGCGGCA ACATGCGTGA GCGGCTGCGC
GCCGCTGGGC ATGAGGTGAT CGGGTACGAC AACCAGGCCG AGCTGAGCGA CGTCGCGAGC
CTGGCGGAGA TGGCGAAGAA GCTGGACGCG CCCCGCGCAG TGTGGGTCAT GGTCCCTGCC
GCCGTCACCG ACGAGACCAT CACCAAGCTG GCGGAGGTGC TCGACACCGG CGACATCATC
GTTGACGGCG GAAACTCGCG GTTCAGCGAC GATGCCCCGC GCGCCGAGCG GCTGAACGAG
CGCGGCATTG GGTACGTCGA TGCCGGGGTT TCCGGGGGCG TTTGGGGCCG ACAGAACGGG
TACGCCCTCA TGGTCGGCGG TGCCAAGGAA CACGTTGACC GACTGATGCC GATCTTCGAG
GCGCTCAAGC CGGCCGGAGA ATTCGGCTTC GTGCACGCCG GGCCGGTCGG TGCCGGACAC
TACGCCAAGA TGGTGCACAA CGGCGTCGAG TACGGTCTCA TGCACGCCTA CGCCGAGGGC
TACGAACTGC TCGCCAAGTC CGAGCTGGTC ACCGATGTCC CCGGCGTCTT CAAGTCGTGG
CGGGAGGGCA CGGTCGTCCG CTCCTGGCTG CTCGACCTCC TCGACCGTGC TCTCGACGAG
GACCCGAAGC TGGCCGAGCT GAGCCCCTAC ACGGAGGACA CCGGCGAGGG TCGGTGGACC
GTGGACGAGG CGGTCCGACT CGCTGTTCCG ATGAACGTCA TCGCCGCCGC GCTCTTCGCC
CGTTTCGCCT CCCGCCAGGA CGACTCGCCC GCGATGAAGG CCGTCGCCGC GCTGCGCCAG
CAGTTCGGCG GGCACGCCGT TCGCAAGCGC TGA
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| Protein sequence | MQLGLVGLGR MGGNMRERLR AAGHEVIGYD NQAELSDVAS LAEMAKKLDA PRAVWVMVPA
AVTDETITKL AEVLDTGDII VDGGNSRFSD DAPRAERLNE RGIGYVDAGV SGGVWGRQNG
YALMVGGAKE HVDRLMPIFE ALKPAGEFGF VHAGPVGAGH YAKMVHNGVE YGLMHAYAEG
YELLAKSELV TDVPGVFKSW REGTVVRSWL LDLLDRALDE DPKLAELSPY TEDTGEGRWT
VDEAVRLAVP MNVIAAALFA RFASRQDDSP AMKAVAALRQ QFGGHAVRKR
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