Gene Ssol_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsol_1952 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfolobus solfataricus 98/2 
KingdomArchaea 
Replicon accessionCP001800 
Strand
Start bp1738560 
End bp1739429 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content35% 
IMG OID 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionACX92163 
Protein GI261602560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAG GTCTTATAGG CCTAGGTATA ATGGGATATA GAATAGCAGC CAATCTAGCT 
AAGGCTAATA AACTTAATTT AGTGTATGAT AGGACTCAGG AAAAAATTGA AAGTTTCGTT
AAGGAATATA AGGTTAACGG TGTACAAAAT ACTAAAGATC TTGTAGAATC ATCAGATGTC
ATAATAACTA TGTTGGCTGA TGACTACGCA GTGAAGTCTG TGGTTGAACC ATTAATACCA
TTGATGAAAG GCAAAATTTT AATTGATATG AGCACTATAA GTCCGACATT AAGTATTAGC
TTAGCCAAGA GGATAGAAAG CAATGGCGGT ACAATGTTTG ATGCTCCTGT AATAGGAACT
TCAGTATTTG TTGAGCAAAA GAAATTGGTT GTATTAGTAG GCGGACCTAA GGATAAGTTT
GACATAGTTA ATGATATAGC TAAGGAAACA GCATCGTTAG TAGTATATAT GGGCCCTAAT
GGTATGGGAC TTTATTCCAA GCTAGTAAAT AACTTGCTTT TAGCCTCTTA TGTCGCAGCT
ATAGCTGAAG CCTATAATTT CGGAATAAGA GCTGGATTAG AGCCTCAACA AGTTGTTAAT
ATATTAACTA CATTAAGTAG TGCTAGGTCT CCAACTACTG AATTAAAAGC ACCTAAATTA
TTGAAAGAGG ACTATTCAAC TCAGTTTGCA ACAAAACACA TGAGGAAAGA TTTAGAAATT
ATTATGAGGG AAGCTCAGAA TTTAAAGATA ATTACACCGG TTTCATCATT AGTATTAGAA
CTGTATAAAA TGGCAGAAGC ATTAGGATAT TCTGAGGCCG ATTTCATCTC AGTTGTAGAA
GTCTTCAAGA AACTCTCACC TAAAACCTAA
 
Protein sequence
MKIGLIGLGI MGYRIAANLA KANKLNLVYD RTQEKIESFV KEYKVNGVQN TKDLVESSDV 
IITMLADDYA VKSVVEPLIP LMKGKILIDM STISPTLSIS LAKRIESNGG TMFDAPVIGT
SVFVEQKKLV VLVGGPKDKF DIVNDIAKET ASLVVYMGPN GMGLYSKLVN NLLLASYVAA
IAEAYNFGIR AGLEPQQVVN ILTTLSSARS PTTELKAPKL LKEDYSTQFA TKHMRKDLEI
IMREAQNLKI ITPVSSLVLE LYKMAEALGY SEADFISVVE VFKKLSPKT