More than 300 homologs were found in PanDaTox collection
for query gene Oter_4474 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010571  Oter_4474  two component transcriptional regulator  100 
 
 		 256 aa  517  1e-146  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1191  two component transcriptional regulator  75.31 
 
 		 256 aa  387  1e-106  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_2855  two component transcriptional regulator  31.92 
 
 		 249 aa  114  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  0.20037  normal  0.188998 
 
 
-
 
NC_013172  Bfae_21090  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  32.64 
 
 		 231 aa  99  7e-20  Brachybacterium faecium DSM 4810  Bacteria  normal  0.664911  n/a   
 
 
-
 
NC_013169  Ksed_21520  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  29.24 
 
 		 222 aa  85.5  8e-16  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0794896  hitchhiker  0.0000630157 
 
 
-
 
NC_011071  Smal_3765  two component transcriptional regulator, winged helix family  30.25 
 
 		 219 aa  83.2  0.000000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.757734  normal  1 
 
 
-
 
NC_008392  Bamb_5869  two component transcriptional regulator  30.71 
 
 		 261 aa  83.6  0.000000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1587  two component transcriptional regulator, winged helix family  29.25 
 
 		 231 aa  82.8  0.000000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_3919  two component transcriptional regulator, winged helix family  33.15 
 
 		 227 aa  83.2  0.000000000000004  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_1090  DNA-binding response regulator  26.72 
 
 		 228 aa  82.8  0.000000000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  decreased coverage  0.00019826  n/a   
 
 
-
 
NC_010557  BamMC406_5652  two component transcriptional regulator  30.71 
 
 		 266 aa  82.4  0.000000000000007  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.0393139 
 
 
-
 
NC_011891  A2cp1_3997  two component transcriptional regulator, winged helix family  32.78 
 
 		 227 aa  82  0.000000000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_3856  two component transcriptional regulator  32.78 
 
 		 227 aa  81.3  0.00000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.199978  n/a   
 
 
-
 
NC_007498  Pcar_0768  two component signal transduction response regulator  30 
 
 		 236 aa  80.5  0.00000000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000566504  n/a   
 
 
-
 
NC_008528  OEOE_0142  DNA-binding response regulator  27.71 
 
 		 231 aa  80.9  0.00000000000002  Oenococcus oeni PSU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_2988  two component transcriptional regulator, winged helix family  28.25 
 
 		 256 aa  80.1  0.00000000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  26.97 
 
 		 230 aa  79.7  0.00000000000004  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  29.17 
 
 		 228 aa  79.7  0.00000000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5089  two component transcriptional regulator, winged helix family  28.87 
 
 		 242 aa  79.3  0.00000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.160869  normal  0.250223 
 
 
-
 
NC_008726  Mvan_4763  two component transcriptional regulator  32.16 
 
 		 230 aa  79.3  0.00000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.96205  normal  1 
 
 
-
 
NC_007005  Psyr_3091  response regulator receiver:transcriptional regulatory protein, C-terminal  26.64 
 
 		 224 aa  79.3  0.00000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.418995  normal  0.496395 
 
 
-
 
NC_013946  Mrub_1402  two component transcriptional regulator, winged helix family  28.4 
 
 		 241 aa  79.3  0.00000000000006  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.154165 
 
 
-
 
NC_013223  Dret_1848  two component transcriptional regulator, winged helix family  26.12 
 
 		 236 aa  79.3  0.00000000000006  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.0065624  normal  1 
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  30.56 
 
 		 226 aa  79  0.00000000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_011126  HY04AAS1_0381  two component transcriptional regulator, winged helix family  25 
 
 		 233 aa  79  0.00000000000008  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2350  two component transcriptional regulator, winged helix family  28.97 
 
 		 226 aa  78.6  0.00000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.275786  n/a   
 
 
-
 
NC_013205  Aaci_0249  two component transcriptional regulator, winged helix family  31.34 
 
 		 232 aa  78.2  0.0000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_3859  two component transcriptional regulator  30.41 
 
 		 235 aa  78.2  0.0000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal  1 
 
 
-
 
NC_014210  Ndas_4793  two component transcriptional regulator, winged helix family  27.73 
 
 		 219 aa  78.6  0.0000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.732153 
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  28.75 
 
 		 222 aa  78.6  0.0000000000001  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_007604  Synpcc7942_1873  two component transcriptional regulator  26.53 
 
 		 226 aa  77.8  0.0000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  28.63 
 
 		 223 aa  77.8  0.0000000000001  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  29.24 
 
 		 222 aa  77.4  0.0000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  29.24 
 
 		 222 aa  77.8  0.0000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011365  Gdia_2157  two component transcriptional regulator, winged helix family  29.44 
 
 		 226 aa  77.8  0.0000000000002  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009436  Ent638_1643  DNA-binding transcriptional regulator PhoP  28.5 
 
 		 224 aa  77.8  0.0000000000002  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II0766  DNA-binding response regulator  34.18 
 
 		 249 aa  77  0.0000000000002  Burkholderia thailandensis E264  Bacteria  normal  0.692099  n/a   
 
 
-
 
NC_007951  Bxe_A3248  two component transcriptional regulator  30.58 
 
 		 232 aa  77.4  0.0000000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.743  normal  1 
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  24.37 
 
 		 223 aa  77  0.0000000000003  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  28.57 
 
 		 235 aa  77  0.0000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal  1 
 
 
-
 
NC_009921  Franean1_5704  two component transcriptional regulator  30.54 
 
 		 220 aa  77  0.0000000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0158381  normal  1 
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  24.37 
 
 		 223 aa  77  0.0000000000003  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_0229  two component transcriptional regulator  24.41 
 
 		 228 aa  77  0.0000000000003  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.444604  normal  0.247928 
 
 
-
 
NC_008578  Acel_1196  two component transcriptional regulator  29.44 
 
 		 240 aa  77  0.0000000000003  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4549  two component transcriptional regulator, winged helix family  29.63 
 
 		 221 aa  76.6  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.703481  normal  1 
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  29.24 
 
 		 222 aa  76.3  0.0000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_009708  YpsIP31758_1304  DNA-binding response regulator  29.3 
 
 		 235 aa  76.3  0.0000000000005  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.18531  n/a   
 
 
-
 
NC_010159  YpAngola_A2763  DNA-binding response regulator  29.3 
 
 		 235 aa  76.3  0.0000000000005  Yersinia pestis Angola  Bacteria  normal  0.0137809  hitchhiker  0.000236663 
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  30.41 
 
 		 229 aa  75.9  0.0000000000006  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_1414  two component transcriptional regulator  28.84 
 
 		 235 aa  75.9  0.0000000000006  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_1312  two component transcriptional regulator, winged helix family  29.75 
 
 		 232 aa  75.5  0.0000000000007  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.1865 
 
 
-
 
NC_007974  Rmet_3934  DNA-binding response regulator  26.69 
 
 		 223 aa  75.9  0.0000000000007  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013512  Sdel_0235  response regulator receiver  29.38 
 
 		 223 aa  75.5  0.0000000000007  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_31270  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  27.54 
 
 		 221 aa  75.5  0.0000000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.014564  normal  0.249814 
 
 
-
 
NC_009077  Mjls_0654  two component transcriptional regulator  26.58 
 
 		 228 aa  75.5  0.0000000000008  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.682961 
 
 
-
 
NC_008146  Mmcs_0661  two component transcriptional regulator  26.58 
 
 		 228 aa  75.5  0.0000000000008  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0674  two component transcriptional regulator  26.58 
 
 		 228 aa  75.5  0.0000000000008  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.850641 
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  26.36 
 
 		 237 aa  74.7  0.000000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  23.95 
 
 		 223 aa  74.7  0.000000000001  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  23.95 
 
 		 223 aa  74.7  0.000000000001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  27.82 
 
 		 236 aa  74.7  0.000000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0411  two component transcriptional regulator  29.05 
 
 		 230 aa  75.1  0.000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007802  Jann_0417  two component transcriptional regulator  25.46 
 
 		 228 aa  74.7  0.000000000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0580  two component transcriptional regulator, winged helix family  28.44 
 
 		 226 aa  74.7  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009715  CCV52592_1693  two-component regulator  29.9 
 
 		 223 aa  74.7  0.000000000001  Campylobacter curvus 525.92  Bacteria  hitchhiker  0.0000232098  n/a   
 
 
-
 
NC_013757  Gobs_4693  two component transcriptional regulator, winged helix family  28.37 
 
 		 220 aa  74.7  0.000000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_3050  two component transcriptional regulator  31.48 
 
 		 224 aa  75.1  0.000000000001  Arthrobacter sp. FB24  Bacteria  normal  0.519152  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  30.09 
 
 		 225 aa  75.1  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_4388  DNA-binding response regulator  27.4 
 
 		 227 aa  74.3  0.000000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  23.95 
 
 		 223 aa  74.3  0.000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  23.95 
 
 		 223 aa  74.3  0.000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0654  two component transcriptional regulator, winged helix family  27.2 
 
 		 229 aa  74.3  0.000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.200991  n/a   
 
 
-
 
NC_006349  BMAA1614  DNA-binding response regulator  33.54 
 
 		 244 aa  73.9  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0469389  n/a   
 
 
-
 
NC_010172  Mext_1411  response regulator receiver  25.11 
 
 		 225 aa  74.3  0.000000000002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.110033 
 
 
-
 
NC_009565  TBFG_11045  transcriptional regulatory protein kdpE  32.64 
 
 		 226 aa  74.3  0.000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010551  BamMC406_2200  two component transcriptional regulator  29.05 
 
 		 232 aa  74.3  0.000000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.365248  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A0660  DNA-binding response regulator  33.54 
 
 		 249 aa  73.9  0.000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_0714  two component transcriptional regulator  29.77 
 
 		 231 aa  74.7  0.000000000002  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  23.95 
 
 		 223 aa  74.3  0.000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009714  CHAB381_0745  two-component regulator  28.12 
 
 		 223 aa  74.3  0.000000000002  Campylobacter hominis ATCC BAA-381  Bacteria  normal  0.802142  n/a   
 
 
-
 
NC_011757  Mchl_1685  two component transcriptional regulator, winged helix family  25.11 
 
 		 225 aa  74.3  0.000000000002  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00118059  normal  1 
 
 
-
 
NC_009075  BURPS668_A2261  DNA-binding response regulator  33.54 
 
 		 263 aa  73.9  0.000000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.338205  n/a   
 
 
-
 
NC_010622  Bphy_2053  two component transcriptional regulator  28.45 
 
 		 232 aa  74.3  0.000000000002  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.745879 
 
 
-
 
NC_012560  Avin_46550  response regulator  29.77 
 
 		 267 aa  74.3  0.000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.0203573  n/a   
 
 
-
 
NC_008390  Bamb_2322  two component transcriptional regulator  29.05 
 
 		 232 aa  74.3  0.000000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.521655  n/a   
 
 
-
 
NC_009485  BBta_6199  OmpR family two component response transcriptional regulator  30.05 
 
 		 255 aa  73.9  0.000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.59766  normal  1 
 
 
-
 
NC_010505  Mrad2831_4988  two component transcriptional regulator  25.11 
 
 		 225 aa  73.9  0.000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  hitchhiker  0.000131605 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  26.58 
 
 		 227 aa  73.9  0.000000000002  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal  1 
 
 
-
 
NC_008835  BMA10229_1975  DNA-binding response regulator  33.54 
 
 		 263 aa  73.9  0.000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0150258  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2178  DNA-binding response regulator  33.54 
 
 		 263 aa  73.9  0.000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.638028  n/a   
 
 
-
 
NC_009079  BMA10247_A0654  DNA-binding response regulator  33.54 
 
 		 263 aa  73.9  0.000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_1407  two component transcriptional regulator, winged helix family  25.78 
 
 		 225 aa  73.6  0.000000000003  Methylobacterium populi BJ001  Bacteria  normal  0.440596  normal  0.126744 
 
 
-
 
NC_013124  Afer_1099  two component transcriptional regulator, winged helix family  29.66 
 
 		 225 aa  73.6  0.000000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  23.53 
 
 		 223 aa  73.6  0.000000000003  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_2401  two component transcriptional regulator  30.61 
 
 		 283 aa  73.6  0.000000000003  Frankia sp. CcI3  Bacteria  normal  0.0476592  normal  0.0197415 
 
 
-
 
NC_010655  Amuc_1728  two component transcriptional regulator, winged helix family  28.63 
 
 		 234 aa  73.6  0.000000000003  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.541096  normal  1 
 
 
-
 
NC_008044  TM1040_0051  two component transcriptional regulator  25 
 
 		 228 aa  73.6  0.000000000003  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.480932 
 
 
-
 
NC_008531  LEUM_1810  DNA-binding response regulator  27.23 
 
 		 233 aa  73.6  0.000000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.0562957  n/a   
 
 
-
 
NC_012669  Bcav_3167  two component transcriptional regulator, winged helix family  29.41 
 
 		 218 aa  73.6  0.000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.436774  normal  0.0676898 
 
 
-
 
NC_010557  BamMC406_5550  two component transcriptional regulator  29.11 
 
 		 239 aa  73.2  0.000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
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