| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1304 |
|---|
| Symbol | |
|---|
| ID | 5385919 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 1524614 |
|---|
| End bp | 1525321 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640864280 |
|---|
| Product | DNA-binding response regulator |
|---|
| Protein accession | YP_001400283 |
|---|
| Protein GI | 153946864 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.18531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT TAATTGCCGA AGACAATGCC CATATTCGTA ATGGCCTTAT GGAAGTATTG
GCCCATGAAG GGTACCGCCC CATCGCGGCA GAAAATGGTG TGCAGGCACT GGCGCTATAC
CGCCAACAAC AGCCGGATTT TATCATTCTT GATATCATGA TGCCGGAGCT TGATGGCTAC
AAGGTGTGCA GGGAGATCCG CAAACACGAC TGGCAAACGC CCATTATCTT TCTGTCCGCG
AAGGATGAGG AGATTGACCG GGTGATCGGG TTAGAGTTGG GTGCTGACGA CTACATCAGT
AAGCCCTTCG GTATCCATGA AATGCGCGCC CGAATCAAGA CTATTGTCCG CCGTTGTCTA
CGAAAAGTAC CTGAATCCGC CGAAGACGCA GGCTTCCCGT TTGGCGATCT GATGGTGTTT
CCCAATGAGT TGTGTGCGAT TCGTGGAGAG ACGCGCCTTG AGCTGTCACT GCGCGAGGTT
AATATCCTAC GCTATCTGTA TCAGCATAAG GGCCGGGTGG TCACCAGAGA TATGTTATTT
GATGCGGTTT GGGGATATGA CCATTTGCCA CAGAGCCGTA CGCTCGACCA GCATATTTCC
AAGCTTCGCA AGACCATTGA ACTGGATCCG GTTCATCCGG TATTGATCCG CACAGTGCAC
GGGGCGGGTT ACCGTTATCA AGGCACGGCG CAGAGCCTGG AAAAATAG
|
|---|
| Protein sequence | MKILIAEDNA HIRNGLMEVL AHEGYRPIAA ENGVQALALY RQQQPDFIIL DIMMPELDGY
KVCREIRKHD WQTPIIFLSA KDEEIDRVIG LELGADDYIS KPFGIHEMRA RIKTIVRRCL
RKVPESAEDA GFPFGDLMVF PNELCAIRGE TRLELSLREV NILRYLYQHK GRVVTRDMLF
DAVWGYDHLP QSRTLDQHIS KLRKTIELDP VHPVLIRTVH GAGYRYQGTA QSLEK
|
|---|
| |