| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1099 |
|---|
| Symbol | |
|---|
| ID | 8323169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013124 |
|---|
| Strand | + |
|---|
| Start bp | 1145125 |
|---|
| End bp | 1145802 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644952227 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003109705 |
|---|
| Protein GI | 256371881 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGACGCC ATGTCCTCGT CGTCGAAGAC GATCCGGCGA TCGCCGATCT CCTCTGCGTG
TACTTTGCCA AGGAGGAGGG CGAGGTCCGT GTCGTCTCCA ACGGCGAGGA CGCGCTCAGC
GCGTTCGATG CCTCGGTGAC CCTGGTGATC CTCGACCTCA ACTTGCCGGG GCGCCTCGAT
GGCCTCGAGG TCGCGCGGGC GATTCGCCAC CGCTCGACCG TCCCGATCAT CGTGCTCTCT
GCGCGCGACA ACGAACTCGA TCGAGTCACC GGACTCGAAC TCGGTGCGGA CGACTACGTC
ACAAAACCCT TCTCACCGCG CGAGCTCCTC GCGCGGGTCC GGGCGATCGA GCGTCGTGTC
GAGGCGAATC CCTCGTCCGC AGCGGCGCTC TCGTTCAACG GCGTCGACTG GGACCCACGG
GCGCGTCAGG TCCTCCGTGA CGGGGTGCCG GTTGCGCTCA CGAACCGGGA GTTCGACCTC
CTCGGGTACT TCTTTGCCCA CCCGGCGACG GCACTCACCC GCCGTGAGCT GCTCGACGGG
GTGTGGGGGC CGGAGTGGTA CGGGGACGAC CGAACCGTCG ACGTCCACGT CCTGCAGCTG
CGCAAGAAGC TCGGCGGCGC CATCGCCATC TCGACCGTCT GGGGTGTCGG CTACCGGTTC
GACCCCGAGG AGCACTAG
|
|---|
| Protein sequence | MGRHVLVVED DPAIADLLCV YFAKEEGEVR VVSNGEDALS AFDASVTLVI LDLNLPGRLD
GLEVARAIRH RSTVPIIVLS ARDNELDRVT GLELGADDYV TKPFSPRELL ARVRAIERRV
EANPSSAAAL SFNGVDWDPR ARQVLRDGVP VALTNREFDL LGYFFAHPAT ALTRRELLDG
VWGPEWYGDD RTVDVHVLQL RKKLGGAIAI STVWGVGYRF DPEEH
|
|---|
| |