Gene Acel_1196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1196 
Symbol 
ID4485518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1333714 
End bp1334436 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID639729972 
Producttwo component transcriptional regulator 
Protein accessionYP_872954 
Protein GI117928403 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGCG TCCTGGTCGT CGACGATGAA CCCGCGATCG TCCGGGCATT GCGGATCAAT 
CTCACCGCCC GGGGCTACGA GGTGTACACC GCGTTCGACG GCCGCACGGC CCTGCAGCTC
GTCACGGCAC ACAAACCGGA CCTCATGATT CTCGATCTGG GCCTGCCGGA CATGGACGGC
ATCGACGTCA TCGGCGGCGT TCGAGGGTGG TCCACCATGC CGATCCTCGT CCTATCGGCC
CGCGACCAGG AAGCGCAGAA GGTCAAGGCA TTGGACGCCG GCGCTGACGA CTACGTGACA
AAGCCGTTCG GCATGGACGA GCTCCTGGCG CGACTCCGGG CTTCCATCCG ACGGGCCCGC
CCGACATCGG CCGAACCGCG CATCATCACT CCGGACTTCA CCATTGACCT CGCGGACAAG
ACCGTGCGCC GCGGCGACGA ACCGATCCGG CTGACCCCGA CCGAATGGCA CATCCTCGAC
ATCCTTGCCC GGCACGCCGG CCGGCTCGTC ACCACCCGCC AACTCCTCCA CGACGTGTGG
GGACCCACCT ACCGGAACGA GACCCACTAC TTGCGGGTGT ACATGGCTCA GCTGCGCCGG
AAATTGGAAC CGGATCCGGC GCACCCCCGG TACCTGCGGA CCGAGCCGGG CATCGGTTAC
CGGTTGGTGG TGGAGCCGAC CCCCGCGGTC GATCCCTCGA CCCCGCCGTC CTCGGTGCCC
TGA
 
Protein sequence
MASVLVVDDE PAIVRALRIN LTARGYEVYT AFDGRTALQL VTAHKPDLMI LDLGLPDMDG 
IDVIGGVRGW STMPILVLSA RDQEAQKVKA LDAGADDYVT KPFGMDELLA RLRASIRRAR
PTSAEPRIIT PDFTIDLADK TVRRGDEPIR LTPTEWHILD ILARHAGRLV TTRQLLHDVW
GPTYRNETHY LRVYMAQLRR KLEPDPAHPR YLRTEPGIGY RLVVEPTPAV DPSTPPSSVP