Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0229 |
Symbol | |
ID | 6201157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 268501 |
End bp | 269187 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641704223 |
Product | two component transcriptional regulator |
Protein accession | YP_001831374 |
Protein GI | 182677228 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.444604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.247928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCAGG TTCTCAAGAT CCTCATCGTC GACGATGATA GCGATCTCCG TTCGGCCCTC TCCGAACAAT TCGCCTTGCA TGAGGAATTC ACCATTCTGC CCGCCGAGAC CGCGCAAGCA GCCCTCGCTG TGATCCATCA GGAGACGCCG GATCTCATCC TCATGGATGT TGGCTTGCCC GATATGGATG GGCGCGACGC GGTCAAGCAG ATGCGGGAGG AGGGATTCAA AAATCCGGTC ATCATGCTCA CAGGCCATGA TTCTGAAGGC GACACGGTGC AAGGATTGGA TGCCGGCGCC AATGATTATG TGACGAAACC CTTCCGCTTC GCCGTCCTGC TCGCGCGGAT CCGCGCTCAT CTGCGTCAGC ATGAAAGCAG CGACGAGGCT ATGTTCCGCA TCGGGCATTA TACATTCCAG CCGGGCGCCA AACATCTCAT CAACGAGAAG GGCTCCAAGC TGCGGCTGAC CGAGAAGGAA ACCGCGATCT TGCGTTTCCT CTATCGCGCC GGCCAGACCG TTGTCACCCG AGACGTCTTG TTGCGCGAGG TCTGGGGCTA TAATGCCAAT GTGACGACGC ATACACTGGA AACACATATT TACCGGCTGC GCCAGAAGAT CGAGGAAGAT CCCGCCAAGG CGCAATTGCT GATCACGGAG ACCGGCGGCT ATAAATTGGT GCCGTGA
|
Protein sequence | MSQVLKILIV DDDSDLRSAL SEQFALHEEF TILPAETAQA ALAVIHQETP DLILMDVGLP DMDGRDAVKQ MREEGFKNPV IMLTGHDSEG DTVQGLDAGA NDYVTKPFRF AVLLARIRAH LRQHESSDEA MFRIGHYTFQ PGAKHLINEK GSKLRLTEKE TAILRFLYRA GQTVVTRDVL LREVWGYNAN VTTHTLETHI YRLRQKIEED PAKAQLLITE TGGYKLVP
|
| |