More than 300 homologs were found in PanDaTox collection
for query gene Pcar_0768 on replicon NC_007498
Organism: Pelobacter carbinolicus DSM 2380



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007498  Pcar_0768  two component signal transduction response regulator  100 
 
 
236 aa  483  1e-136  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000000566504  n/a   
 
 
-
 
NC_007517  Gmet_1291  two component transcriptional regulator  63.04 
 
 
240 aa  306  2.0000000000000002e-82  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000572556  hitchhiker  0.0000375019 
 
 
-
 
NC_002939  GSU1879  DNA-binding response regulator  63.48 
 
 
238 aa  305  5.0000000000000004e-82  Geobacter sulfurreducens PCA  Bacteria  decreased coverage  0.000557668  n/a   
 
 
-
 
NC_009483  Gura_1334  two component transcriptional regulator  63.48 
 
 
243 aa  304  9.000000000000001e-82  Geobacter uraniireducens Rf4  Bacteria  normal  0.592557  n/a   
 
 
-
 
NC_010814  Glov_3569  two component transcriptional regulator, winged helix family  62.88 
 
 
235 aa  301  4.0000000000000003e-81  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2942  two component transcriptional regulator, winged helix family  63.32 
 
 
234 aa  296  2e-79  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1342  two component transcriptional regulator, winged helix family  63.32 
 
 
234 aa  295  3e-79  Geobacter bemidjiensis Bem  Bacteria  normal  0.0144629  n/a   
 
 
-
 
NC_008609  Ppro_0507  two component transcriptional regulator  60.87 
 
 
236 aa  295  4e-79  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1848  two component transcriptional regulator, winged helix family  49.78 
 
 
236 aa  219  1.9999999999999999e-56  Desulfohalobium retbaense DSM 5692  Bacteria  hitchhiker  0.0065624  normal 
 
 
-
 
NC_009943  Dole_0622  two component transcriptional regulator  44.3 
 
 
240 aa  193  2e-48  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1402  two component transcriptional regulator, winged helix family  44.68 
 
 
241 aa  182  4.0000000000000006e-45  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.154165 
 
 
-
 
NC_013132  Cpin_0673  two component transcriptional regulator, winged helix family  40.27 
 
 
235 aa  181  7e-45  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.996485  normal 
 
 
-
 
NC_009675  Anae109_4159  two component transcriptional regulator  42.54 
 
 
230 aa  181  9.000000000000001e-45  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.667277  normal  0.0359145 
 
 
-
 
NC_013061  Phep_3446  response regulator receiver  40.97 
 
 
234 aa  178  4.999999999999999e-44  Pedobacter heparinus DSM 2366  Bacteria  normal  0.664648  normal 
 
 
-
 
NC_007760  Adeh_0411  two component transcriptional regulator  41.67 
 
 
230 aa  175  7e-43  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2988  two component transcriptional regulator, winged helix family  41.67 
 
 
256 aa  173  1.9999999999999998e-42  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  39.57 
 
 
231 aa  170  2e-41  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_014148  Plim_3821  response regulator receiver  39.68 
 
 
264 aa  169  3e-41  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.169085  n/a   
 
 
-
 
NC_011145  AnaeK_0439  two component transcriptional regulator, winged helix family  41.67 
 
 
230 aa  169  3e-41  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4665  two component transcriptional regulator, winged helix family  41.78 
 
 
235 aa  169  3e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  0.880727  normal  0.209776 
 
 
-
 
NC_007912  Sde_3703  two component transcriptional regulator  42.04 
 
 
232 aa  168  7e-41  Saccharophagus degradans 2-40  Bacteria  normal  0.230236  normal  0.0884672 
 
 
-
 
NC_011891  A2cp1_0440  two component transcriptional regulator, winged helix family  41.23 
 
 
230 aa  168  7e-41  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  38.72 
 
 
231 aa  168  8e-41  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
NC_007498  Pcar_2629  two component signal transduction response regulator  39.48 
 
 
238 aa  167  1e-40  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4168  two component transcriptional regulator  43.04 
 
 
237 aa  167  2e-40  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.426048 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  42.04 
 
 
229 aa  166  2.9999999999999998e-40  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011729  PCC7424_3600  two component transcriptional regulator, winged helix family  40.6 
 
 
250 aa  165  5e-40  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00284005 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  39.47 
 
 
232 aa  165  5.9999999999999996e-40  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  39.32 
 
 
235 aa  164  8e-40  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  42.86 
 
 
233 aa  164  9e-40  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_011071  Smal_0470  two component transcriptional regulator, winged helix family  41.08 
 
 
239 aa  164  2.0000000000000002e-39  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0260801  normal 
 
 
-
 
NC_013093  Amir_3871  two component transcriptional regulator, winged helix family  44 
 
 
227 aa  163  2.0000000000000002e-39  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000000473157  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  40 
 
 
226 aa  163  2.0000000000000002e-39  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  39.29 
 
 
230 aa  164  2.0000000000000002e-39  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  39.29 
 
 
230 aa  162  3e-39  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  43.75 
 
 
236 aa  163  3e-39  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  42.61 
 
 
233 aa  162  3e-39  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  40.35 
 
 
237 aa  163  3e-39  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  37.5 
 
 
239 aa  162  4.0000000000000004e-39  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  37.5 
 
 
239 aa  162  4.0000000000000004e-39  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  38.63 
 
 
236 aa  162  4.0000000000000004e-39  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_013161  Cyan8802_2657  two component transcriptional regulator, winged helix family  39.66 
 
 
250 aa  162  6e-39  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.350713 
 
 
-
 
NC_011726  PCC8801_3460  two component transcriptional regulator, winged helix family  39.66 
 
 
250 aa  161  7e-39  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  40.71 
 
 
234 aa  161  1e-38  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  37.28 
 
 
229 aa  160  1e-38  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  40.97 
 
 
243 aa  160  2e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  40.71 
 
 
226 aa  160  2e-38  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  40.77 
 
 
229 aa  160  2e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  44.2 
 
 
230 aa  159  3e-38  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_010465  YPK_1414  two component transcriptional regulator  38.84 
 
 
235 aa  159  3e-38  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  37.23 
 
 
242 aa  159  4e-38  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_009708  YpsIP31758_1304  DNA-binding response regulator  38.84 
 
 
235 aa  159  4e-38  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.18531  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  40.09 
 
 
231 aa  159  4e-38  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  44.2 
 
 
230 aa  159  4e-38  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  39.22 
 
 
230 aa  159  4e-38  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_010159  YpAngola_A2763  DNA-binding response regulator  38.84 
 
 
235 aa  159  4e-38  Yersinia pestis Angola  Bacteria  normal  0.0137809  hitchhiker  0.000236663 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  40.71 
 
 
234 aa  159  5e-38  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  40.34 
 
 
235 aa  159  5e-38  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  38.84 
 
 
256 aa  158  6e-38  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  39.47 
 
 
235 aa  158  6e-38  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  38.84 
 
 
235 aa  158  8e-38  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_0987  two component transcriptional regulator, winged helix family  43.83 
 
 
233 aa  158  9e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.195539  n/a   
 
 
-
 
NC_013171  Apre_0895  two component transcriptional regulator, winged helix family  34.63 
 
 
232 aa  157  9e-38  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  39.04 
 
 
235 aa  157  1e-37  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  39.04 
 
 
235 aa  157  1e-37  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  39.04 
 
 
235 aa  157  1e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  39.04 
 
 
235 aa  157  1e-37  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  39.04 
 
 
235 aa  157  1e-37  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  39.3 
 
 
228 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  39.91 
 
 
235 aa  157  1e-37  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  39.04 
 
 
235 aa  157  1e-37  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  39.04 
 
 
235 aa  157  1e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  39.04 
 
 
235 aa  157  1e-37  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_011729  PCC7424_2845  two component transcriptional regulator, winged helix family  43.16 
 
 
234 aa  157  1e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  40.69 
 
 
229 aa  157  1e-37  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  39.11 
 
 
226 aa  157  1e-37  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_013501  Rmar_0819  two component transcriptional regulator, winged helix family  36.91 
 
 
246 aa  157  1e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  39.22 
 
 
230 aa  156  2e-37  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  40 
 
 
272 aa  157  2e-37  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  39.91 
 
 
235 aa  156  2e-37  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_010816  BLD_1073  putative response regulator  39.91 
 
 
234 aa  156  2e-37  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  40.26 
 
 
225 aa  156  3e-37  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  39.74 
 
 
265 aa  156  3e-37  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_010682  Rpic_0295  two component transcriptional regulator, winged helix family  38.79 
 
 
242 aa  156  3e-37  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0984  two component transcriptional regulator, winged helix family  38.49 
 
 
246 aa  156  3e-37  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.0723779 
 
 
-
 
NC_012856  Rpic12D_0307  two component transcriptional regulator, winged helix family  38.79 
 
 
242 aa  156  3e-37  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_2262  two component transcriptional regulator  39.11 
 
 
231 aa  155  4e-37  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  36.8 
 
 
232 aa  155  4e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1865  response regulator receiver  38.67 
 
 
224 aa  155  4e-37  Nocardioides sp. JS614  Bacteria  normal  0.59899  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  41.05 
 
 
230 aa  155  5.0000000000000005e-37  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  42.74 
 
 
234 aa  155  6e-37  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  40.5 
 
 
235 aa  155  7e-37  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  42.55 
 
 
232 aa  155  8e-37  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.70324 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  41.92 
 
 
231 aa  154  8e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  39.83 
 
 
236 aa  154  9e-37  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  38.5 
 
 
229 aa  154  9e-37  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  41.45 
 
 
234 aa  154  1e-36  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  39.11 
 
 
226 aa  154  1e-36  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  38.84 
 
 
226 aa  154  1e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  40.43 
 
 
230 aa  154  1e-36  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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