Gene Psyr_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3091 
Symbol 
ID3368612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3706730 
End bp3707404 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content59% 
IMG OID637653436 
Productresponse regulator receiver:transcriptional regulatory protein, C-terminal 
Protein accessionYP_236161 
Protein GI66046320 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.418995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.496395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATTC TGGTTATTGA AGACCACCGT GATATTCACG ATAACCTGCT GGAATTCTTC 
GAACTCAGGG GGCATGCGGT AGAAGGGGCG CTGGACGGCC TGAGCGGGCT GCACCTGGCC
GCCTCGAAAC GCTTCGATGC GATCATTCTC GACATCATGC TGCCCGGCAT CGACGGCAAT
CAGATCTGCC ACAGCCTGCG CCAGTATTCG AAGTCGGAAG TCGCGATTGT GATGCTCAGC
GCGCGCGATG AACTGGATGA TCGGCTCACC GGTTTCAAGG TGGGGGCCGA CGACTACATC
ACCAAGCCGT TCGCGATGTC CGAAGTGCTC GCCAGAGTCG AAGCGATCGT CAGCCGACGG
CAGCGCCAGG ACAACCGGAT GATGGTGGTC GCCGACCTGC AGTTCGATCT GGACACCCTT
GAAATCACCC GCAAAGGCGT GCCCTTGAAG CTCAATCCGA CCAACATGAA GCTGTTGGAA
CTGTTGATGC GCAAGAGCCC GCATATCGTC AAGCGCTCCG ACCTGGAAGA GGCGCTTTGG
GGCCGTGATG CCCCGAACAG CAGCAGCTTG CGCAGCAACA TCCATGTGCT CAGGCGGGTA
CTGGATGGCG GGCACGACAC GCCATTGCTG CACACCGCCC ATGGCCTGGG TTACAAGCTG
TGCGTGCAGC GCTGA
 
Protein sequence
MNILVIEDHR DIHDNLLEFF ELRGHAVEGA LDGLSGLHLA ASKRFDAIIL DIMLPGIDGN 
QICHSLRQYS KSEVAIVMLS ARDELDDRLT GFKVGADDYI TKPFAMSEVL ARVEAIVSRR
QRQDNRMMVV ADLQFDLDTL EITRKGVPLK LNPTNMKLLE LLMRKSPHIV KRSDLEEALW
GRDAPNSSSL RSNIHVLRRV LDGGHDTPLL HTAHGLGYKL CVQR