Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3091 |
Symbol | |
ID | 3368612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3706730 |
End bp | 3707404 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637653436 |
Product | response regulator receiver:transcriptional regulatory protein, C-terminal |
Protein accession | YP_236161 |
Protein GI | 66046320 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.418995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.496395 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATTC TGGTTATTGA AGACCACCGT GATATTCACG ATAACCTGCT GGAATTCTTC GAACTCAGGG GGCATGCGGT AGAAGGGGCG CTGGACGGCC TGAGCGGGCT GCACCTGGCC GCCTCGAAAC GCTTCGATGC GATCATTCTC GACATCATGC TGCCCGGCAT CGACGGCAAT CAGATCTGCC ACAGCCTGCG CCAGTATTCG AAGTCGGAAG TCGCGATTGT GATGCTCAGC GCGCGCGATG AACTGGATGA TCGGCTCACC GGTTTCAAGG TGGGGGCCGA CGACTACATC ACCAAGCCGT TCGCGATGTC CGAAGTGCTC GCCAGAGTCG AAGCGATCGT CAGCCGACGG CAGCGCCAGG ACAACCGGAT GATGGTGGTC GCCGACCTGC AGTTCGATCT GGACACCCTT GAAATCACCC GCAAAGGCGT GCCCTTGAAG CTCAATCCGA CCAACATGAA GCTGTTGGAA CTGTTGATGC GCAAGAGCCC GCATATCGTC AAGCGCTCCG ACCTGGAAGA GGCGCTTTGG GGCCGTGATG CCCCGAACAG CAGCAGCTTG CGCAGCAACA TCCATGTGCT CAGGCGGGTA CTGGATGGCG GGCACGACAC GCCATTGCTG CACACCGCCC ATGGCCTGGG TTACAAGCTG TGCGTGCAGC GCTGA
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Protein sequence | MNILVIEDHR DIHDNLLEFF ELRGHAVEGA LDGLSGLHLA ASKRFDAIIL DIMLPGIDGN QICHSLRQYS KSEVAIVMLS ARDELDDRLT GFKVGADDYI TKPFAMSEVL ARVEAIVSRR QRQDNRMMVV ADLQFDLDTL EITRKGVPLK LNPTNMKLLE LLMRKSPHIV KRSDLEEALW GRDAPNSSSL RSNIHVLRRV LDGGHDTPLL HTAHGLGYKL CVQR
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