35 homologs were found in PanDaTox collection
for query gene Mesil_1230 on replicon NC_014212
Organism: Meiothermus silvanus DSM 9946



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  100 
 
 
561 aa  1150    Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  71.12 
 
 
516 aa  728    Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  35.57 
 
 
573 aa  276  6e-73  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  32.67 
 
 
506 aa  241  2e-62  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  30.05 
 
 
533 aa  207  4e-52  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  31.02 
 
 
525 aa  182  2e-44  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.33895 
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  30.36 
 
 
516 aa  181  4e-44  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0650  CRISPR-associated Cse1 family protein  29.11 
 
 
525 aa  135  3e-30  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  25.57 
 
 
517 aa  130  5.0000000000000004e-29  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  32.12 
 
 
567 aa  113  9e-24  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4093  CRISPR-associated protein, Cse1 family  24.22 
 
 
518 aa  112  2.0000000000000002e-23  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2439  CRISPR-associated protein, Cse1 family  24.12 
 
 
525 aa  107  4e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_1535  Cse1 family CRISPR-associated protein  34.09 
 
 
568 aa  103  1e-20  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  31.87 
 
 
540 aa  98.2  4e-19  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2573  CRISPR-associated Cse1 family protein  34.72 
 
 
560 aa  96.7  9e-19  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00155149 
 
 
-
 
NC_013510  Tcur_2680  CRISPR-associated protein, Cse1 family  31.37 
 
 
561 aa  96.3  1e-18  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00401114  n/a   
 
 
-
 
NC_007333  Tfu_1600  CRISPR-associated Cse1 family protein  34.07 
 
 
555 aa  95.1  3e-18  Thermobifida fusca YX  Bacteria  normal  0.214237  n/a   
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  30.41 
 
 
550 aa  94  6e-18  Frankia sp. CcI3  Bacteria  normal  0.830051  normal 
 
 
-
 
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  26.04 
 
 
495 aa  92.4  2e-17  Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal 
 
 
-
 
NC_013235  Namu_3054  CRISPR-associated protein, Cse1 family  33.09 
 
 
555 aa  90.9  5e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  0.044999  decreased coverage  0.000092711 
 
 
-
 
NC_014210  Ndas_1281  CRISPR-associated protein, Cse1 family  32.59 
 
 
573 aa  84.3  0.000000000000005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0923  CRISPR-associated protein, Cse1 family  29.35 
 
 
540 aa  75.1  0.000000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3909  CRISPR-associated protein, Cse1 family  29.52 
 
 
1540 aa  73.6  0.000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0587749  normal  0.0865606 
 
 
-
 
NC_009483  Gura_0827  CRISPR-associated Cse1 family protein  29.32 
 
 
545 aa  73.6  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1592  CRISPR-associated Cse1 family protein  27.53 
 
 
549 aa  72.8  0.00000000002  Thermobifida fusca YX  Bacteria  normal  0.440854  n/a   
 
 
-
 
NC_012912  Dd1591_0911  CRISPR-associated protein, Cse1 family  29 
 
 
507 aa  72  0.00000000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  28.06 
 
 
722 aa  70.1  0.00000000009  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2671  CRISPR-associated protein, Cse1 family  33.53 
 
 
507 aa  69.3  0.0000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  26.72 
 
 
484 aa  68.2  0.0000000004  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_013159  Svir_17140  CRISPR-associated protein, Cse1 family  24.89 
 
 
525 aa  60.8  0.00000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_0760  CRISPR system CASCADE complex protein CasA  26.14 
 
 
556 aa  60.5  0.00000008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0334414 
 
 
-
 
NC_010831  Cphamn1_2159  CRISPR-associated protein, Cse1 family  26.23 
 
 
529 aa  53.9  0.000007  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.0719403  normal 
 
 
-
 
NC_011059  Paes_1418  CRISPR-associated protein, Cse1 family  23.1 
 
 
519 aa  46.6  0.001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.128485 
 
 
-
 
NC_009943  Dole_2984  CRISPR-associated Cse1 family protein  22.63 
 
 
529 aa  45.1  0.003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1385  hypothetical protein  23.83 
 
 
506 aa  43.5  0.009  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
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