| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0018 |
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| Symbol | |
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| ID | 3903593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 25679 |
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| End bp | 27331 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877348 |
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| Product | hypothetical protein |
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| Protein accession | YP_479141 |
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| Protein GI | 86738741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.830051 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGTT TCAACCTGAT CGATGGGCAA TGGATCCCAG TGATCAAGCG GGGGCGGCGC
CTGGAGGTGG GGATCAGGAA GGCGCTCGTC GACGCTCACA CGATCGACGG GCTGGCCCTT
GATGATCCGC TCGAAGCCGT GGCGGTGCTG CGTCAGGTCC TGCTGCCCGT CGTCCTGGAC
GTGTTCGGCG CCCCCCGTAC CGACGAGGAG TGGTCACAGC GGTGGGAGGC TGGCTGTTTC
GACCGGATTA TCAGGAAAGA TCGGGCTGAG GATGAGGAGG GCATCGAGTC GTATCTGATC
CGACAGGCGG CACGATTTCA TCTGTTTCAT CCGACGGCTC CGTTTGCGCA GGTCGCCGGG
TTGCGGACCG CGAAGGACGA GACGAAGCCG GTGTCGCTGC TGGTTCCGCG GCTGGCCTCG
GGGAACAATG TTCCGCTGTT CAGTTCCCGG ACCGAGAACG ACCCGCCGAG CCTGACGCCC
GCTGCGGCGG CACGGGCGTT GCTCGCAGCC CATTGCTGGG ACACCGCCGC GATCAAGACC
GGAGCGGCGG ATGACCCGAA GGTCAAGACG GGGAAGACGA TGGGGAACCC GACCGGGCCG
CTCGGGCAGT TCGGGATCGT CCTGCCGCTG GGTGAGACGC TCTTCCATAC GCTGATGCTC
AGCATCCCCG TCCTGCGGCA CGGTCTGCGG CAGAAGGACC GGCCGCAATG GAGATCCGAA
AGCAGCGCCA CCTCCCGCTG GGAGACTCGC GCCCCGGAAG GGCTACTGGA TCTGCTGACC
TGGCAGTCGC GGCGGATCCG GCTCGTGCCC GAGGCAGACC CGACGGCTGT CGAGGATGTC
TCGGTCCGAC GGGTGGTGCT CACCGCCGGT GACCGGCTCA CCGGATCGGT GCACGCACTC
GAACCGCACA CGGCGTGGCG GCAGGTTGAC AAGCCCAAAG CCGACGAGCC GCCGGTCCGT
CCGGTGCGGC ATCAGCCGGG CCGGTCGGCC TGGCGCGGGC TGGAGGCTCT GCTGACCACA
ACGCCCTTGT CGAGTGACAA AGTGTTCGCG CCGACGGCGC TGTCGCAGCT CGCCCGGCTG
CGTGACGACG GCTATGTCCC CGATGATCTG CCACTGCAGG TACTGACCGT CGGGGTGAAG
TACGGCACGC AGTCGGCGGT GATCGACGAG GTAATGGCCG ATGAGATTCC CCTCCCGGTC
ACCGCGCTGG CACGGGACTC CGCGGTCCGT GAGACCGTGC TGGCGGTGGC GGCCCAGGCC
GAGAGCCTGC GGATCGCCGC CAACCGTCTC GGCGACGATC TTCGTGAGGC TGCCGGTGCG
ACGGACAAGC TGCCGTGGGA CAAGGGCCAG CGGCTCGGAG AAATACTGAT CCACAGCTTC
AATCCGACGG TGCACCGGCT GCTAGCCGGG TTGCAGCAGC ATCCGGAGGA CGCCAAGCGG
GCCGAACTTG CGTGGCGGAT CCTCGCTCGG CGGTTGGCGT GGGAGGTCGT CGACCCGGTG
TTGTCCGCTG CCGGTCCTGA GACGTTCCTG GGCCGCGATC CCGGTGAGCC GTTCGGCGCC
CGCCTCGCCG GCGCCGAGAT GTCATTCCGG CGCACGCTCA ACGACGTGCT CGGCAAGGAC
GAGGACAACC GGCTTGCTCT GGCCGCCGCC TGA
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| Protein sequence | MNGFNLIDGQ WIPVIKRGRR LEVGIRKALV DAHTIDGLAL DDPLEAVAVL RQVLLPVVLD
VFGAPRTDEE WSQRWEAGCF DRIIRKDRAE DEEGIESYLI RQAARFHLFH PTAPFAQVAG
LRTAKDETKP VSLLVPRLAS GNNVPLFSSR TENDPPSLTP AAAARALLAA HCWDTAAIKT
GAADDPKVKT GKTMGNPTGP LGQFGIVLPL GETLFHTLML SIPVLRHGLR QKDRPQWRSE
SSATSRWETR APEGLLDLLT WQSRRIRLVP EADPTAVEDV SVRRVVLTAG DRLTGSVHAL
EPHTAWRQVD KPKADEPPVR PVRHQPGRSA WRGLEALLTT TPLSSDKVFA PTALSQLARL
RDDGYVPDDL PLQVLTVGVK YGTQSAVIDE VMADEIPLPV TALARDSAVR ETVLAVAAQA
ESLRIAANRL GDDLREAAGA TDKLPWDKGQ RLGEILIHSF NPTVHRLLAG LQQHPEDAKR
AELAWRILAR RLAWEVVDPV LSAAGPETFL GRDPGEPFGA RLAGAEMSFR RTLNDVLGKD
EDNRLALAAA
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