| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2573 |
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| Symbol | |
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| ID | 5706145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2929653 |
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| End bp | 2931335 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641272036 |
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| Product | CRISPR-associated Cse1 family protein |
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| Protein accession | YP_001537406 |
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| Protein GI | 159038153 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00155149 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACC CCGCGCCCTC TTTCTCTCTG AGTGGGCAAC CCTGGATCCC GGTGCTCGAT
CTGGCCGGTC GCCGACGCCT GGTCTCCCTC GCCGAGTTGT TCGCTCAGGC GGCGGAGCTG
CGGGCCGTCG CCGGTGACCT GCCGACCCAG ACGTCCGCGC TGCTCAGACT CCTGCTCGCC
ATCCTGCACC GCGCAGTTGA CGGGCCCGAG GACGAACGCG TCTGGCAGGG TTTGTGGCGG
CAGCCCGACC TGCCAGCCGG TGACGTCGTC GACTACCTCG ACGAATACCG GGACCGCTTC
GACCTACTGC ATCCGGTCAC GCCCTTCTAT CAGGTCGCCG ACCTGCGAAC GCAGAAGCAG
AACGACGTGT TCGGCCTGCA GCGGTTCATC GCCGACGTAC CGAACGGCGC GCCGTACCTC
ACCACCCGGC TCGGGCCCGG GTTGCAGCGG CTGACCCCGG CTGAGGCCGC GGTGTGGCTG
GTGCACTGCC AGGCGTATGA CACCTCCGGC ATCAAGTCCG GGGCGGTCGG AGACCCCCGG
GTCAGCGGCG GCAAGGGCTA CCCCATCGGC CCCGGCGCCG GTGGTTCCCT GGGCTTGGTC
TACCTCGAGG GCCGGACGCT GCGCGAGACC CTCCTGCTCA ACCTCGTCCC GCTCGACAAC
GCCTACCTCC AGCAGGATCC CGAGCGTGAC TCCCCAATGT GGGAACGCGA CCCGCACGGC
CCCGCCGAGG AGGCCGAGCG GGACCGAGGT CCACACGGCC CACTCAACCT CTACACCTGG
CAGTCCCGGC GGATCCGGCT CTTCGGCGAC CAGACCGGCA TCACCGGCGC AATGATCGCC
AACGGCGACC GGATCACCTG GACAAACCTG CACCGCAAGG AACCGATGAG CGGCTGGCGG
CGCAGTCCCC ACCAGGAGAA GAAACTCGTC CTCCCCACCG TCTACCTGCC CAGCCTGCAC
GACCACACCC GGGCCCTCTG GCGCGGGCTG ACCGCGGTGC TGCCCACGTC CGCCGAGAAA
CCGGGCGCCG ACGCCCCGAC CCGGCGGCCA CCAGCAGTCA GCCAGTGGCT GGCCGGGCTG
CGGGTCACGG GACTGATCGA CGACCGGTAC CGGGTCACCA CCCGCGCCGT CGGCGTCATC
TACGGCAACC AGATGTCGGT GATCAACGAG ATATACCACG ACGCGGTGAC CATGCCCGTG
CAGGCGTTCG AGCCGACCGG CCCACTCGCC ACCACCATCG TCGATAGCGC GGCCGACGCC
GACGCCGCCG TCACAACCCT GCGTGGCCTC GCCGTCAACC TCTGCAGAGC CTCGGGTGGG
TACGGAGAAC GGCCCGAGGA CCCTCCGGCC GCTGCGGCGG ACCGGGCCGC CGAACTCGCC
TACGCCGAAC TGGATGTCCT GTTCCGGCAG TGGCTGGGCG GCCTCGACCC AGCAGACGAC
CCGGCGCAGG CCCGCGTCCG GTGGCAAACG CAGGCCAGGC GGTGCGTCCT GCGCCTCGGC
AGCGACCTGG TCGACTGGTC CGGGCCACGC GCCTGGGCCG GTCGCTACGT CGACCCGGAA
AAGAAGAAGC GCATCAGTAG TCCACTGGCC GACAGGCACT TCCGGGACGC ACTGCACCGG
GCGCTGCCCC TGGCGACGAC CACCATCGCT ACCCCATCCG CTCCCCAGGA GGTGCCGGCG
TGA
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| Protein sequence | MSDPAPSFSL SGQPWIPVLD LAGRRRLVSL AELFAQAAEL RAVAGDLPTQ TSALLRLLLA
ILHRAVDGPE DERVWQGLWR QPDLPAGDVV DYLDEYRDRF DLLHPVTPFY QVADLRTQKQ
NDVFGLQRFI ADVPNGAPYL TTRLGPGLQR LTPAEAAVWL VHCQAYDTSG IKSGAVGDPR
VSGGKGYPIG PGAGGSLGLV YLEGRTLRET LLLNLVPLDN AYLQQDPERD SPMWERDPHG
PAEEAERDRG PHGPLNLYTW QSRRIRLFGD QTGITGAMIA NGDRITWTNL HRKEPMSGWR
RSPHQEKKLV LPTVYLPSLH DHTRALWRGL TAVLPTSAEK PGADAPTRRP PAVSQWLAGL
RVTGLIDDRY RVTTRAVGVI YGNQMSVINE IYHDAVTMPV QAFEPTGPLA TTIVDSAADA
DAAVTTLRGL AVNLCRASGG YGERPEDPPA AAADRAAELA YAELDVLFRQ WLGGLDPADD
PAQARVRWQT QARRCVLRLG SDLVDWSGPR AWAGRYVDPE KKKRISSPLA DRHFRDALHR
ALPLATTTIA TPSAPQEVPA
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