Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2984 |
Symbol | |
ID | 5695843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3583769 |
End bp | 3585358 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641265600 |
Product | CRISPR-associated Cse1 family protein |
Protein accession | YP_001530864 |
Protein GI | 158522994 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGC TCACAGACAA ATGGATTCCG GTTATACGCG AAAACGGGCC GGATAAAATC GCGCCCTGGC AGATTGTCGA GACTGAGAAT CCGGTTATGG AAATCAACGC GCCGCGCCCG GATTTCCAGG GTGCGCTGTA TCAATTTTTT ATCGGCCTGC TGCAAACCTG TTTTGCGCCG GAAGATGAGG ATCAGTGGCG GCAGTACTGG GAAAATATGC CTAAGCCTGA TGAGTTAAAA AAGGTTTTTG AGAAAAATAC TATTAAGAAG AATTTTGAGT TGTATAACCC TGATGGCCCG GCGTTTATGC AGGACTTTGA TTTGTCTGAT GGTGAAGAAA AGCACATTTC CTTTTTATTA ATTGAGGCTC CGGGCGGGAA AACACAGAAA GACAATCTGG ACCATTTTAT AAAACGCGGT CACGTGAACA GCCTTTGTGA GAGTTGTACC GCCTCGGCTT TGTTTACACT ACAACTTAAC GCGCCAGCGG GAGGACAAGG GAACAGGGTC GGATTAAGGG GCGGCGGCCC TTTAACAACA TTGCTTGTCC CGGAAGAGGC CAACTCGAAC CTGTGGCATA AGGTCTGGCT CAACATTTTG AATAAGGAGG ACAACGAGGA GTTCTTCAGC CCCGGACCAC TTGATGATAG TGTCCTGCCG TGGTTGGGAC CGACCCGAAT ATCGGACAAA CAGGGGGTTG CCACTACGCC CGAAGATTGC CATGCTTTAC AAATGTATTG GGGCATGCCC CGCCGGATAA GGCTTAGAGC CAATGAAGAA AAGGGCAATT GTGACATCTG CGGACACCCA TCCAACGTGC TTTATAAGAC ATATAAAGCA AAAAATTTTG GGATTGACTA TGTCGGCGCC TGGGTCCACC CGCTTACGCC ATATCGTTTT GACACCGACC ATCAAAAGCC TCCCCTTTCG CTTAAAGGTC AGAAAGGCGG CCTGGGCTAC AGACACTGGC TCGGCCTGGC GTTGCAGGAT ACTGAAACCG GGAATAAGGC AGCGACGACA GTACAGTTCT ATAACGACGA ACGGGGGCCG ACGCTTTTCA ACAACCAGTC TGCCGCTTTG TGGTGCTTCG GCTTTGATAT GGACAATATG AAAGCCCGCT GCTGGTATGA CACCCATTTC CCTGTTCTCA TACTTAATAA ACAACAAAAA GAGAATCTGA TTGCATGGGC AGTTGAATTG ATCGGTTCGG CAAGGGCGAC GGTTAAAATC CTGAGGGATG CCGTAAAATC TGCCTGGTTT AAACGTCCCG GCGACGCCAA GGGAGACATG AGTGCTATTG ACCGGCAGTT CTGGGAAACG ACCGAACCGG GGTTTTATAA GTTACTTGAC GACATGGCGA AACTGCCTAG CGCGACCAGA ATGGCTCCCC CTGAAATATA TGCAAACTGG TTTCGAATGA TCAAAGAATC GATGTTTGAT ATTTTTGAGA AAGCCACCCT GTACAACAGT CCCGAAGAAG TTGATCTTAA ACAAATAGTA TCAGCCAAAC AGTCTTTAAC CAAAACATTC TATAACAACA GCGTAATCAA GAATTTGAAA GCAAAGGCAA AAGAGGAGGT TGCCCAATGA
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Protein sequence | MNLLTDKWIP VIRENGPDKI APWQIVETEN PVMEINAPRP DFQGALYQFF IGLLQTCFAP EDEDQWRQYW ENMPKPDELK KVFEKNTIKK NFELYNPDGP AFMQDFDLSD GEEKHISFLL IEAPGGKTQK DNLDHFIKRG HVNSLCESCT ASALFTLQLN APAGGQGNRV GLRGGGPLTT LLVPEEANSN LWHKVWLNIL NKEDNEEFFS PGPLDDSVLP WLGPTRISDK QGVATTPEDC HALQMYWGMP RRIRLRANEE KGNCDICGHP SNVLYKTYKA KNFGIDYVGA WVHPLTPYRF DTDHQKPPLS LKGQKGGLGY RHWLGLALQD TETGNKAATT VQFYNDERGP TLFNNQSAAL WCFGFDMDNM KARCWYDTHF PVLILNKQQK ENLIAWAVEL IGSARATVKI LRDAVKSAWF KRPGDAKGDM SAIDRQFWET TEPGFYKLLD DMAKLPSATR MAPPEIYANW FRMIKESMFD IFEKATLYNS PEEVDLKQIV SAKQSLTKTF YNNSVIKNLK AKAKEEVAQ
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