| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_17350 |
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| Symbol | |
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| ID | 8387064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 1791322 |
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| End bp | 1793025 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644975808 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_003133590 |
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| Protein GI | 257055758 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCTGCG TGACAGATGA GTACAACTTG CTGACGCAGC CATGGTTGCC GATACGGCAT
CGGCACAGTG GCGCGCTCGA AGCGGTGGGG ATCGCTGAGG CACTACTGCG TTCCCATGAA
CTCGCCGATC TGGTCGTTGA TGTGCCGACC CAGGTTCCGG CGCTGCTGCG ACAAGTTCTC
CTACCCGTCA TGGTCGATGC CCTCGGACCA CCGACCACGC GAGAGGGATG GTCGAAACGG
TTTGCGGCCG GGCGCTTCAC CGACGAAGAG CGTGACCGAC TGTCTGAGTA TTTCGACCAG
TATCGCGATC GATTCGCGCT CTTCCACGAC ACGCGGCCCT TCGCACAGGT TGCGGGATTG
CGAACCCCCA AGGGGGAGAC GAAAGGGACC GCGGTTCTGG TGGCCACGGC GGCGTCCGGG
AACAACGTCC CGTTGTTCAC ATCCCGCACC GACGGTGATC CGTTCCCGCT GACGCCGGGG
GAGGCTGCGC GGTGGCTGCT GCACACACAG TGTTGGGATA CCGCCGCCAT CAAAAGCGGC
GCTGAAGGCG ACCCGAAAGT CAAGGCGGGC AAGACGACCG GGAACCCGAC CGGACCACTG
GGACAGCTCG GTGTCGTCGT TCCCGTTGGA CGCAGTCTGT ATGAGACGTT GCTGTTGAAC
ACCCCGGTCC ACCCCGAGGA CATGTGGGGG GTTCCACAGT GGAAACGCGA TCCTCCTTTC
GGACCTGAAT GGGATACCTA TGCCCCGCAG GGCTTGTTGG AGCTGTGGAC GTGGCAGTCA
CGGCGGGTGC GCCTTTCACC GGAGCAAACC GGTGACGGGC AGCGGGTCTG CCGTGTGGTG
CTGACCGCGG GCGATCGCAT CAGCGTGCTA CCGGAGTGGG AACCGCACAC GACGTGGACG
TCCGCCCCGA ATCCCAAGGC AGGTGCCCCC GCGCGACGAC CGCGTCGACA TGCCCCGGGC
AAGGCCATCT GGCAAGGCAT GGAGGCACTG CTCGCCGTGG AACGCGAGGA GAAAGGGAAA
TTCCACACCA GCGATCTGCT CCGCCAGATC AACAGCGCCC GTGTCGACGG TGTGATCGCC
GACGACTACC CCCTGCGGGT ACAGACTTAC GGGCTGCTGT ACGGCAACCA GTCCGCTGTG
GTGGAAGACA TCCTGCACGA TGCGATGCCT CTACCCGTGG CCGCGTTACG CGCCGAGGGT
GAAGTCTATG ACCTGGTGGC CGAAGCGACC GAACAAGCTG AGGAACTCGC GCAGGCTGTC
AACAGCCTGT CGGCGGACCT ACGGCGCGCG CAGGGGGCGG ACCCCATCCC GTGGGACAAG
GGGCACCGGC CCGGTGAGCT CGTGTTGCAC GCGCTCGACC CGTTGGTGCG TCGACTTCTG
GCCGGAATCA GTGCCACGGG CACTGACTTC GACGTGCTGA GTCGGGGCCA GCGCGCGTGG
GAGCAGAAGG CGTGGGCCGA GACCATGCGG ATCGCCGAAC GAGTGCTCGG CACGGCGAGC
GCCGGCGCCT TCATCGGCCG CGAGGTCGCC GACAAAGGCA AGAAGGACGG CAAGAAGGTC
CTGTACTCGC TGGGTACGGC GGAGCGCGAT TTCCGCGCCC GGCTCGCCCG AATCCTTCCT
CGGGCCGCCG AACACCGCCG GGAAGCGAAA CCGGAGCTGG GCGTCGCATC TTCGGGCGCG
TCGACACAAG GGCAGGGGTC ATGA
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| Protein sequence | MRCVTDEYNL LTQPWLPIRH RHSGALEAVG IAEALLRSHE LADLVVDVPT QVPALLRQVL
LPVMVDALGP PTTREGWSKR FAAGRFTDEE RDRLSEYFDQ YRDRFALFHD TRPFAQVAGL
RTPKGETKGT AVLVATAASG NNVPLFTSRT DGDPFPLTPG EAARWLLHTQ CWDTAAIKSG
AEGDPKVKAG KTTGNPTGPL GQLGVVVPVG RSLYETLLLN TPVHPEDMWG VPQWKRDPPF
GPEWDTYAPQ GLLELWTWQS RRVRLSPEQT GDGQRVCRVV LTAGDRISVL PEWEPHTTWT
SAPNPKAGAP ARRPRRHAPG KAIWQGMEAL LAVEREEKGK FHTSDLLRQI NSARVDGVIA
DDYPLRVQTY GLLYGNQSAV VEDILHDAMP LPVAALRAEG EVYDLVAEAT EQAEELAQAV
NSLSADLRRA QGADPIPWDK GHRPGELVLH ALDPLVRRLL AGISATGTDF DVLSRGQRAW
EQKAWAETMR IAERVLGTAS AGAFIGREVA DKGKKDGKKV LYSLGTAERD FRARLARILP
RAAEHRREAK PELGVASSGA STQGQGS
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