| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_0988 |
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| Symbol | |
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| ID | 8323052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 1007749 |
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| End bp | 1009371 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952116 |
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| Product | CRISPR-associated protein, Cse1 family |
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| Protein accession | YP_003109600 |
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| Protein GI | 256371776 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGCCTG AGATGCACTT TGACCTCTCC TCCGAGCCGT GGCTGCCCGT ACGGTTCAGA
GACGGTCGGC GAAGCGAGGT GAGTCTTCGA GACATATTCG TGCTCGCCCA TACGATCGTT
GGCTTCGACG TCGACTTCCC GACCCTGGAG CCGGCCTTGC TTCGACTCGT GCTCGCCCTC
GCCTACCGCA TCTTGCGAGG CCCGAAGGAT GACGCCGAGT GGGGTCGCCT CTGGGAGGCT
GACCGGTTTT CGGAGGACGC CATCGACGAT TACTTCGCCC GTTGGCGCCA TCGCTTCGAC
CTGTTCTCGA AGGAGTTCCC GTTCTTTCAG GTCGCCGACC TCGAGCCAGC AGGCAAGGGC
GGCGTCAAGA CCGCCAACAG TCTGGTGGCC TACGCGCCAT CAGGCAACAA CGTGCCCGTC
TTCACGCCCA TCACCGACCG CACGGAGCTG GCACTGAGCC CCGCCGAGGC AGCACGCTGG
CTCGTGGAGC GCCATGCCTT CGGCTCGGCA TCCGACAAGA CTGGGGCCAA GGGGAATCCG
AAGGTCAAGG GCGGCAAGGA CACCCCCGCG ATCGGCTACC TCGCTTGGAT CGGGTTCGTC
GCGCCCGTCG GGCAGACACT GCGCGAGACA CTCCTCCTCA ACCTCGTCCC GTGGCAGTAT
CGCAATCTCA TCCGTGGAGG CGAGGACGAC GTGCCCGCAT GGGAACGTGA CCCGCTGGGG
CCGACACGGG TGATGCGCGC GCCCGACGGT GTGTGCGACC TGTTCACCTG GCAAGGTCGG
CGGATTCGCC TCTTCCCGGA GCGCCGCGGC GATGCTATCG TCGTCCCGCG GGTACTCATC
TGCGCTGGCG ATGAGGTTGA TCGTCGCGCC GCGCGAGACG TCGATCCTCA CGTCGGATGG
CGGATGGAGA GCAGGCGTGG TGCAGAGGTC AGCTATGTGC CACTGCGGGC GCGCCCGGGC
CAGCAGGTGT GGCGGGGCCT GAGCAGCGTG CTCGCGCTCG GCGCTGAGGA ACAGCGCGCA
GGCGTCCTGT CCTTCGTCGA GGGTCTGCAA TCGCGGGGGA TCGCCCTCGT GTCCCTCCTC
GTCACTTCCG CAAAGTTCGG GAACATGTCG ACCACCCTCG ACGACCTGGC CTACGACCGA
CTCGACACTC CTCTTGCCGT ACTGAACCAG GAGGATCCCG CAGCAGCCAC CGTCGCAATC
GACGCAGTCA CCTTCGCAGC GCACGCTGCC CAAGCACTCG GCTACGTCGC CGAAGCTCGC
TACCTCTCCT ACGACCTCTC CTTCCACGAG GAATCAAAGC GACACCGGGT GCCCGAAGGG
AAGGCAGCGC TCGCCAAGGC GGCACGGTCG GCGCTCGCCG AGGAGCTCTA CGGTCGGCTC
GACGCGCCCT ATCGCCACTT CCTGACGGGA CTCGCGAACA TCGACGACCT CGAGCGCCCT
CGGGCTGAGT GGGCTGCCCT CGTCGAGGCC GTCGCTCGGG ATCTCGCGAG CCGGGAGCTA
GCGCAGCTCG CCCCGGCGCA GGCCTTCGCG GGTGTCGCTG GCGAGGACCG CTTCCGACGA
ATGCTCGCAC GGGCTCGCAA CGAGTTCAGT CCATCGGATA GCCCAGAGAA GGGAGCTGCA
TGA
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| Protein sequence | MEPEMHFDLS SEPWLPVRFR DGRRSEVSLR DIFVLAHTIV GFDVDFPTLE PALLRLVLAL
AYRILRGPKD DAEWGRLWEA DRFSEDAIDD YFARWRHRFD LFSKEFPFFQ VADLEPAGKG
GVKTANSLVA YAPSGNNVPV FTPITDRTEL ALSPAEAARW LVERHAFGSA SDKTGAKGNP
KVKGGKDTPA IGYLAWIGFV APVGQTLRET LLLNLVPWQY RNLIRGGEDD VPAWERDPLG
PTRVMRAPDG VCDLFTWQGR RIRLFPERRG DAIVVPRVLI CAGDEVDRRA ARDVDPHVGW
RMESRRGAEV SYVPLRARPG QQVWRGLSSV LALGAEEQRA GVLSFVEGLQ SRGIALVSLL
VTSAKFGNMS TTLDDLAYDR LDTPLAVLNQ EDPAAATVAI DAVTFAAHAA QALGYVAEAR
YLSYDLSFHE ESKRHRVPEG KAALAKAARS ALAEELYGRL DAPYRHFLTG LANIDDLERP
RAEWAALVEA VARDLASREL AQLAPAQAFA GVAGEDRFRR MLARARNEFS PSDSPEKGAA
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