| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2825 |
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| Symbol | |
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| ID | 4458856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 3483197 |
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| End bp | 3484750 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639703599 |
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| Product | CRISPR-associated Cse1 family protein |
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| Protein accession | YP_846938 |
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| Protein GI | 116750251 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTT TTTCGTTCAA CCTGATCGAC CGGCCGTGGA TCTCCTGTGT GGAGCTGTCC
GGCCGAAGGC GGACCCTGGG GCTCCACGAA GTGCTTTCCC GGGCTCATGA GCTTCGCGGA
ATCGAACTGC AGAGCCCGCT GGCTGAAACA GCCCTTTTTC GCGTGCTGCT CGCCGCGGTG
CATCGCATCG TTGAAGGCCC GAAGGGCACC GGCGAATGGA GGGCACTCTA CCAGGCAACA
AAACTGCCTG GTGGGCGTAT CGATGCGTAT TTTGAAAAAT GGAGTCACCG CTTCGATCTA
TTCTCCAAAG AGGAGCCGTT TTACCAGACG CCGGGGCTTG CGATCCGGGA TGCCAAGGGA
GCTGAGGCTC CCGCGGTTAT AGCCGGCATC ATGCTCGAAC GCGCAAGCGG CAACAACAAA
ACCATCTTCG ACCACAGCAT GGACGAAGAC CGTGGATGTC TTTCGCCCGA AGAGGCCGTG
TTGGCTCTAA TAGCCGCCCA GATGTACTCT CTGAGGGGTC TTAATAAGAA GACGACCAAC
CTCTTTGGCT ACCAGGAGAG TTTCTCTGAC TCAGTGATGG TGGGTGGAAT ATTTGCTGCC
CTTCAGGGAC AGAGTCTCTT TGAATCACTG TTGTTAAACC TTCTTCTCTA CACTGACAAT
TTGCCCATCC ACTCGAGCCG CGATGACTGT CCTGTGTGGG AACGACACGA TCACGGCGAA
ACGGGCGTTC GAACACCCCG TGGATACCTG GATTATCTCA CCTGCAAATG CCGCCACATT
CTTCTTGTCC CTGAACCAGG CCTCGACGGA CCTTGCATAA GGCACGTGCA TATCGCACAG
GGTGAAGCAT TCCAGGACGT TGACAACCCA GGTTTCATAA AGCGCAAGAA TAAGGAGGGC
AAATGGCTCC CCGTCCAGAT GCAACCGGCT CGTTTGGTCT GGAGAGACAG TATCTCGCTC
TTTTCGTTCG ACACGGGGAA ACGAGAGGGG GATCGTCGGC CGGACGCATT TCGCTTGGTC
GGCGACATTG CGTTACGCCG CATTGTCGCT TTGCCTTCAA AATACAGGTG TTGCACGTAT
GGCCTCGCAA ACGACCAGGC AAACCCGCTC GCATGGCGCA AGGAAACACT GAATATCCCG
ACCGCCCTGC TCTCGGATCC TGACCTTGTG GCCTGCCTTC GTGAAGCAAT GGATCTGTCG
GAAAAAGCAC ATACGATCTT AAGAAACGCA ATCAGGACTT ATATGGACAA ATATTTGCCC
AGGAACTCCA GGGACGTTAC AGAGAAATTG AATGCCACGG GCGCTTCTCG GCTCTTCTGG
GACCGGCTCG AGAGCCATTT CAACGCTTTT CTTTTGGAAA TCGAGAACCA GGACAAAGCG
CTTGTCGCGT GGGAGCGCAA CATAGAAAGA GCTGCTTTGG AGGCCTTTGA AGCGTGTCTG
AAGCAGCGGT ACGCGGACTC GGCCAAGAAA TTTCGCGCTT GGACCGAAGC ACACGGTCAA
TTGGTCGCAA GGTTGGCCAC ACTGTCAAAG ACTCTCTCAA GGAAAGGAGG TTAA
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| Protein sequence | MSAFSFNLID RPWISCVELS GRRRTLGLHE VLSRAHELRG IELQSPLAET ALFRVLLAAV
HRIVEGPKGT GEWRALYQAT KLPGGRIDAY FEKWSHRFDL FSKEEPFYQT PGLAIRDAKG
AEAPAVIAGI MLERASGNNK TIFDHSMDED RGCLSPEEAV LALIAAQMYS LRGLNKKTTN
LFGYQESFSD SVMVGGIFAA LQGQSLFESL LLNLLLYTDN LPIHSSRDDC PVWERHDHGE
TGVRTPRGYL DYLTCKCRHI LLVPEPGLDG PCIRHVHIAQ GEAFQDVDNP GFIKRKNKEG
KWLPVQMQPA RLVWRDSISL FSFDTGKREG DRRPDAFRLV GDIALRRIVA LPSKYRCCTY
GLANDQANPL AWRKETLNIP TALLSDPDLV ACLREAMDLS EKAHTILRNA IRTYMDKYLP
RNSRDVTEKL NATGASRLFW DRLESHFNAF LLEIENQDKA LVAWERNIER AALEAFEACL
KQRYADSAKK FRAWTEAHGQ LVARLATLSK TLSRKGG
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