31 homologs were found in PanDaTox collection
for query gene Ppro_2342 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  100 
 
 
506 aa  1047    Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  32.13 
 
 
561 aa  232  1e-59  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  34.09 
 
 
516 aa  230  4e-59  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  28.87 
 
 
573 aa  186  7e-46  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  29.18 
 
 
525 aa  181  2e-44  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.33895 
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  32.14 
 
 
516 aa  178  2e-43  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  29.83 
 
 
533 aa  177  4e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  27.34 
 
 
517 aa  152  1e-35  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0650  CRISPR-associated Cse1 family protein  26.58 
 
 
525 aa  125  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  28.92 
 
 
540 aa  113  1.0000000000000001e-23  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  27.11 
 
 
550 aa  103  9e-21  Frankia sp. CcI3  Bacteria  normal  0.830051  normal 
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  27.19 
 
 
567 aa  102  2e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2439  CRISPR-associated protein, Cse1 family  22.9 
 
 
525 aa  100  7e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011884  Cyan7425_4093  CRISPR-associated protein, Cse1 family  24.61 
 
 
518 aa  96.3  1e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  25.99 
 
 
495 aa  91.7  3e-17  Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal 
 
 
-
 
NC_013235  Namu_3054  CRISPR-associated protein, Cse1 family  25.68 
 
 
555 aa  91.7  3e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  0.044999  decreased coverage  0.000092711 
 
 
-
 
NC_013510  Tcur_2680  CRISPR-associated protein, Cse1 family  27.43 
 
 
561 aa  90.9  5e-17  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00401114  n/a   
 
 
-
 
NC_007333  Tfu_1592  CRISPR-associated Cse1 family protein  27.02 
 
 
549 aa  85.1  0.000000000000003  Thermobifida fusca YX  Bacteria  normal  0.440854  n/a   
 
 
-
 
NC_007333  Tfu_1600  CRISPR-associated Cse1 family protein  25.81 
 
 
555 aa  84.7  0.000000000000004  Thermobifida fusca YX  Bacteria  normal  0.214237  n/a   
 
 
-
 
NC_013131  Caci_3909  CRISPR-associated protein, Cse1 family  28.49 
 
 
1540 aa  84.3  0.000000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0587749  normal  0.0865606 
 
 
-
 
NC_009953  Sare_2573  CRISPR-associated Cse1 family protein  27.63 
 
 
560 aa  82.8  0.00000000000001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00155149 
 
 
-
 
NC_014165  Tbis_1535  Cse1 family CRISPR-associated protein  24.54 
 
 
568 aa  82  0.00000000000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  24.22 
 
 
484 aa  77.4  0.0000000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_014210  Ndas_1281  CRISPR-associated protein, Cse1 family  27.49 
 
 
573 aa  65.5  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  24.33 
 
 
722 aa  65.1  0.000000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013721  HMPREF0424_0760  CRISPR system CASCADE complex protein CasA  25.24 
 
 
556 aa  58.9  0.0000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0334414 
 
 
-
 
NC_012912  Dd1591_0911  CRISPR-associated protein, Cse1 family  30.3 
 
 
507 aa  57.8  0.0000004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2671  CRISPR-associated protein, Cse1 family  28.22 
 
 
507 aa  56.2  0.000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0923  CRISPR-associated protein, Cse1 family  29.48 
 
 
540 aa  54.7  0.000004  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0827  CRISPR-associated Cse1 family protein  27.49 
 
 
545 aa  50.8  0.00005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17140  CRISPR-associated protein, Cse1 family  24.56 
 
 
525 aa  50.8  0.00006  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
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