Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_0923 |
Symbol | |
ID | 7284600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 1077940 |
End bp | 1079562 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643581720 |
Product | CRISPR-associated protein, Cse1 family |
Protein accession | YP_002479508 |
Protein GI | 220904196 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTTG TGTCAGATCA GTGGATACCT GTACTGGACA ACAGCGGGCA GCACCAGCTT GTCAACCTGC GTGAGGCCCT CTGCGAAGGG GCGCAATGGC GCGATCTGGC CGTACGCCCA CACGAGAGGG TGGCCCTGAT GCGCCTGCTG CTGTGCATTG CTCATGCTGC GCTCAATGGC CCGTCTCGGG AAGACTGGTC CCGCGTACCC CAACTGCTGC CGGATGCCGT CGCTGCGTAT CTGCAGAAAT GGCAGGATAG TTTTGACCTG TTCCACCCCC AAAAGCCCTT CTTACAGATT TCCGGCCTTA AAGCGGCAAG TAAAAAAACA AAACGGACTG AAGATGATGA AGGCCCCCTT GTCAAAGCCA GCAAGCTGGA TTTTACCCTG GCCACAGGCA ATCAGAGTAC CCACTTTGAC CATGAGGGCA GTTTGGCGCA GCGGTCGGCA GAGCAGGCAT TGCCTGCCCT GAACCTTTTG TCTTACCTGT GCTTCAGCCC CGGCGGCCTC ATTGGAACCG TAGTCTGGAA CAACCATGTT ACCGCGCGAA GTTCCAGCGA CGGTCCCTGC GCTGTGGGCT CCATGACGCA TACGTTCTGG CGGGGCGCAA ATGTGCTCCA GACCCTGCAC CTCAACATGT GTGCCCGAGA TGACATCGAG CGGCGACTGG CAAGTATTCC CGAGGCCGGC TGGGGAAAGC CTGTGTGGGA ACAAATGCCT GTAAGCTTTG ATGATGCAAA TGCATGGCGC AACGCAACCC ATACGTATCT GGGGCGTTTG ACCCCGCTTT CACGCCTTGT GCTGTTTCAG CGTGGCGCTT CAGGCATGAC TCTTGGCGCA GGGCCGGTTT TTCCCAATTT TAACAATGCC AAGGCTCCCT ATGTGGAAGA ACCAACTTCC ACAATCATCC TCAGGGGCAA GGACAACAAA CAGACACGGG CGCTTTTGCC TGTTACACCG GGCAAGGCGC TCTGGCGCGA ACTGCACGCC CTTGTAGCAC ATCGCAACAA GGACGATGTG GGGGGATTCT GGGCTGCGGC TTTAGCCAGC GCTGAAGGTG CATCTGGCAG GGATATGGTT GTGGCGGGCA TGGCGAGAGA TCAGGCCGAA GTCGTGGACA CCCTTGAATC CGTTTACCAC ATACCGCAAG CCATGCAAAA AACTCCAGGG CAACTGGTTT ACGGGCAGGG GGTACAATAC GCCGAAGACA TGTCCCGTAA ACTGGGCTGG GCTGTGGATA CGTACCGTGA AAAAGTGGAT GGAGGGTGGG CAGGCAGGCT CAAAGGGGCT GGAGCAGGTA AGGTGGAGTT GTTGATCAAG CTTCGTCAAA AAGCCTTCAC ACTGTACTGG ACAGCAGCTG AGCAGAGCCT GCCCCTGCTG TTCGCCTGTG TGGAAAGTCT GGGCAGTGAT GCTTTTCCTG CAGCGCAAAA GGCGTGGCAA AAAGCGCTGT TTGTCGCAGC TCGCAAGGCA TATTCCTCCA TCTGCGCGCC GCAAACCCCG AGACAGCACA GAGCCTTTGC CCTTGGCCTT GCCAGGCTCT GCAAACCAGT TGCGACAGCA GCTTCACCAA ATATGGCTTC TGAAATTTCT TCCGATACAT TCCATGAGGA GGACGACGAA TGA
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Protein sequence | MNLVSDQWIP VLDNSGQHQL VNLREALCEG AQWRDLAVRP HERVALMRLL LCIAHAALNG PSREDWSRVP QLLPDAVAAY LQKWQDSFDL FHPQKPFLQI SGLKAASKKT KRTEDDEGPL VKASKLDFTL ATGNQSTHFD HEGSLAQRSA EQALPALNLL SYLCFSPGGL IGTVVWNNHV TARSSSDGPC AVGSMTHTFW RGANVLQTLH LNMCARDDIE RRLASIPEAG WGKPVWEQMP VSFDDANAWR NATHTYLGRL TPLSRLVLFQ RGASGMTLGA GPVFPNFNNA KAPYVEEPTS TIILRGKDNK QTRALLPVTP GKALWRELHA LVAHRNKDDV GGFWAAALAS AEGASGRDMV VAGMARDQAE VVDTLESVYH IPQAMQKTPG QLVYGQGVQY AEDMSRKLGW AVDTYREKVD GGWAGRLKGA GAGKVELLIK LRQKAFTLYW TAAEQSLPLL FACVESLGSD AFPAAQKAWQ KALFVAARKA YSSICAPQTP RQHRAFALGL ARLCKPVATA ASPNMASEIS SDTFHEEDDE
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