| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3760 |
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| Symbol | |
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| ID | 5105755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4144085 |
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| End bp | 4145662 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505015 |
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| Product | CRISPR-associated Cse1 family protein |
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| Protein accession | YP_001189240 |
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| Protein GI | 146308775 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02547] CRISPR system CASCADE complex protein CasA/Cse1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.33895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAC GCAGACAACA GGGAATGGAG GTGGGCATGG ATGAAGCTTT CACCCTGCTC
GACGAACCAT GGCTGGCAGT GCGGATGCAC GATGGGCAGG TGGGTGAGCT GGGTTTGCTG
GAGCTCTTCG AGCGCTCCGG TGAGATCGGC GCCCTGGCGG AAACCTCACC GCCGAGCCTG
ATTGCGCAAT ACCGGTTGTT GCTGGCGATT ACCCATCGCG CCATCACCCA GGCGCAAGGG
CGTTGGACGG ATGCCGAGCG CATGCGCTGG CATCAGAACG GCCTGCCGCT GGCGGCCATC
CGTGACTATC TGGAACGTTG GCGCGAGCGC TTCTGGCTGT TCCATCCGCA GTACCCCTTC
ATGCAGGTGG CGGCGCTGGC CGACGCCGAA GAAACCCGCG ACAAACTCAA ACCCTGGACG
CAAATCTCCC TGGCCAGCGC CAACGGCAAT GCGCCGGTGG TGTTCGACCA TTCCTGCGAC
CTGGCGCCTC GCAGCATCGG TGCTGCCGAT GCGCTGTGTA CTCTGCTGGG CTTTTTGCAG
TTCACTCCCG GCGGCTTGGT CAAGACGCTG CGCGATTCCG ACAAGGCAGG CGCGCTGGCG
AATACGGCTG CGGTGATGCC GATGGGCGAT TCGCTGGCGC AAAGCCTTTG CCTGGCCCTG
CACCCACCGA CTCAAACAGG GCATGAAGAC CTGCCCGCCT GGGAGCGCAG CGCGCCGAGC
ATCGCCCAAC TGTGTGGCGA ACCCGAATTG GCGACTGGCC CCAATGATCG CTACACCCGG
CAGAGCCGGG CTGTCCTGCT ACTGGCGGAC GATGAGCGTC GGGTGCAATG GATTCGTTTC
GCCGCTGGTC TGGCGTTGGG TGATGATGTG CAGGCGCCCG ATCCCATGGC CAGCTACCGG
GCCGGTAGCA ACAGCCTGGT TCGTCTGAGC TTCACCGAGG GGCGTGCCCT GTGGCGCGAT
CTGCCGGCGC TACTGCCGGA CGCCGAGGGC AAGGCTTCGC AACCTGCCGC GGTGCTGGAG
TGGGCGGCCA ACCTGCAGTT CTATCTGGGC AACGGTGTGC AACCGCTGCT GATCGCCGGG
CTGGCCAGCG ATCAGGCCAA GCTGCTGCGC TGGCGCTCCG AGCGTATCGC GCTGCCCGCC
AAGCTGCTGG CTTCGCCCGA TCATGCCAAC GAATTGCGCC GCTATGTGCG CGATGCCGAA
GAGTTGTTCA GCGCCTTGCG CAAGCTGGCG ACCGGCATGC TCGCCGAAAC CCTGCCTGAC
CCCGGCAGCA AGGACACCTG GGCCCGTGCG CGCAGCCTGA TCGACGCCGG ACCGGCGAGT
GCCCTGTTCT TCGCCGGCGC CGAGCGCCAG CTGGGGCGTG TCATGGCCCT GCTGGGGAGC
GACGAGCTGG ACCAGGCCGA GGCGCTCTGG CGGCAGAGCC TGCATAAGGC GGCGCATGAG
GCTTGGCAAA CTGTGCTGAC CGACCTGGGG CGAGGCGCCA AAGCACTGCG TGCCGAGGCG
CGCCATTATC CACGCCTGCT GGGGCTGCTC GGCCCGTTGC GGGAGACTCC CACACCCGAC
AAGGAGGTTC GCGCATGA
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| Protein sequence | MESRRQQGME VGMDEAFTLL DEPWLAVRMH DGQVGELGLL ELFERSGEIG ALAETSPPSL
IAQYRLLLAI THRAITQAQG RWTDAERMRW HQNGLPLAAI RDYLERWRER FWLFHPQYPF
MQVAALADAE ETRDKLKPWT QISLASANGN APVVFDHSCD LAPRSIGAAD ALCTLLGFLQ
FTPGGLVKTL RDSDKAGALA NTAAVMPMGD SLAQSLCLAL HPPTQTGHED LPAWERSAPS
IAQLCGEPEL ATGPNDRYTR QSRAVLLLAD DERRVQWIRF AAGLALGDDV QAPDPMASYR
AGSNSLVRLS FTEGRALWRD LPALLPDAEG KASQPAAVLE WAANLQFYLG NGVQPLLIAG
LASDQAKLLR WRSERIALPA KLLASPDHAN ELRRYVRDAE ELFSALRKLA TGMLAETLPD
PGSKDTWARA RSLIDAGPAS ALFFAGAERQ LGRVMALLGS DELDQAEALW RQSLHKAAHE
AWQTVLTDLG RGAKALRAEA RHYPRLLGLL GPLRETPTPD KEVRA
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