32 homologs were found in PanDaTox collection
for query gene Ndas_1281 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_1600  CRISPR-associated Cse1 family protein  65.27 
 
 
555 aa  676    Thermobifida fusca YX  Bacteria  normal  0.214237  n/a   
 
 
-
 
NC_014210  Ndas_1281  CRISPR-associated protein, Cse1 family  100 
 
 
573 aa  1134    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2680  CRISPR-associated protein, Cse1 family  65.99 
 
 
561 aa  664    Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00401114  n/a   
 
 
-
 
NC_014165  Tbis_1535  Cse1 family CRISPR-associated protein  64.02 
 
 
568 aa  628  1e-179  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3909  CRISPR-associated protein, Cse1 family  55.19 
 
 
1540 aa  527  1e-148  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0587749  normal  0.0865606 
 
 
-
 
NC_009953  Sare_2573  CRISPR-associated Cse1 family protein  47.58 
 
 
560 aa  395  1e-109  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00155149 
 
 
-
 
NC_013235  Namu_3054  CRISPR-associated protein, Cse1 family  42.15 
 
 
555 aa  361  2e-98  Nakamurella multipartita DSM 44233  Bacteria  normal  0.044999  decreased coverage  0.000092711 
 
 
-
 
NC_013124  Afer_0988  CRISPR-associated protein, Cse1 family  37.27 
 
 
540 aa  209  9e-53  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_17350  CRISPR-associated protein, Cse1 family  32.68 
 
 
567 aa  205  1e-51  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0018  hypothetical protein  33.71 
 
 
550 aa  193  6e-48  Frankia sp. CcI3  Bacteria  normal  0.830051  normal 
 
 
-
 
NC_013721  HMPREF0424_0760  CRISPR system CASCADE complex protein CasA  25.91 
 
 
556 aa  135  9.999999999999999e-31  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.0334414 
 
 
-
 
NC_013946  Mrub_3019  Cse1 family CRISPR-associated protein  30.41 
 
 
516 aa  112  1.0000000000000001e-23  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.00000306277  normal  0.0835975 
 
 
-
 
NC_014212  Mesil_1230  CRISPR-associated protein, Cse1 family  32.08 
 
 
561 aa  108  2e-22  Meiothermus silvanus DSM 9946  Bacteria  unclonable  0.00000214368  normal  0.502097 
 
 
-
 
NC_013526  Tter_1896  CRISPR-associated protein, Cse1 family  29.03 
 
 
533 aa  108  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.189081  n/a   
 
 
-
 
NC_011884  Cyan7425_4093  CRISPR-associated protein, Cse1 family  27.18 
 
 
518 aa  108  2e-22  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2439  CRISPR-associated protein, Cse1 family  28.46 
 
 
525 aa  108  4e-22  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009439  Pmen_3760  CRISPR-associated Cse1 family protein  27.99 
 
 
525 aa  96.3  1e-18  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.33895 
 
 
-
 
NC_008010  Dgeo_2630  CRISPR-associated Cse1 family protein  29.54 
 
 
573 aa  86.3  0.000000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2342  CRISPR-associated Cse1 family protein  27.49 
 
 
506 aa  86.7  0.000000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_17180  hypothetical protein  28.03 
 
 
516 aa  85.1  0.000000000000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0650  CRISPR-associated Cse1 family protein  26.38 
 
 
525 aa  82.8  0.00000000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2825  CRISPR-associated Cse1 family protein  25.89 
 
 
517 aa  82.8  0.00000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0923  CRISPR-associated protein, Cse1 family  27.07 
 
 
540 aa  71.6  0.00000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0827  CRISPR-associated Cse1 family protein  32.14 
 
 
545 aa  60.5  0.00000008  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_13870  CRISPR-associated protein, Cse1 family  28.74 
 
 
484 aa  59.3  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.578004  normal  0.601258 
 
 
-
 
NC_009953  Sare_1972  CRISPR-associated Cse1 family protein  28.51 
 
 
495 aa  59.7  0.0000002  Salinispora arenicola CNS-205  Bacteria  normal  0.355127  normal 
 
 
-
 
NC_009457  VC0395_A2671  CRISPR-associated protein, Cse1 family  30.4 
 
 
507 aa  58.5  0.0000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0911  CRISPR-associated protein, Cse1 family  26.94 
 
 
507 aa  49.7  0.0001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0942  CRISPR-associated protein, Cse1 family  29.55 
 
 
722 aa  49.7  0.0002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A3153  CRISPR-associated protein Cse1 family  23.6 
 
 
511 aa  47  0.0009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.670831 
 
 
-
 
NC_009468  Acry_3315  CRISPR-associated Cse1 family protein  35.14 
 
 
529 aa  45.8  0.002  Acidiphilium cryptum JF-5  Bacteria  normal  0.439764  n/a   
 
 
-
 
NC_011094  SeSA_A3097  crispr-associated protein, Cse1 family  24.44 
 
 
511 aa  45.1  0.003  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  unclonable  0.0000104629  normal 
 
 
-
 
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