More than 300 homologs were found in PanDaTox collection
for query gene LGAS_1013 on replicon NC_008530
Organism: Lactobacillus gasseri ATCC 33323



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008530  LGAS_1013  carbamoyl phosphate synthase small subunit  100 
 
 		 351 aa  707    Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000000694166  normal  1 
 
 
-
 
NC_004116  SAG1363  carbamoyl phosphate synthase small subunit  36.62 
 
 		 356 aa  238  1e-61  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.013904  n/a   
 
 
-
 
NC_008532  STER_0558  carbamoyl phosphate synthase small subunit  35.8 
 
 		 362 aa  236  6e-61  Streptococcus thermophilus LMD-9  Bacteria  normal  1  n/a   
 
 
-
 
NC_008527  LACR_1709  carbamoyl phosphate synthase small subunit  36.36 
 
 		 357 aa  233  3e-60  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_008531  LEUM_1371  carbamoyl-phosphate synthase small subunit  37.64 
 
 		 359 aa  229  5e-59  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.850128  n/a   
 
 
-
 
NC_006274  BCZK3646  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  226  4e-58  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A3985  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  8e-58  Bacillus cereus B4264  Bacteria  normal  0.289727  n/a   
 
 
-
 
NC_003909  BCE_3932  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  1e-57  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS3738  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  1e-57  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_3629  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  1e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_4026  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  1e-57  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0667428  n/a   
 
 
-
 
NC_011658  BCAH187_A3936  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  1e-57  Bacillus cereus AH187  Bacteria  normal  0.0146429  n/a   
 
 
-
 
NC_011773  BCAH820_3901  carbamoyl phosphate synthase small subunit  36.52 
 
 		 365 aa  225  1e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000355158 
 
 
-
 
NC_011772  BCG9842_B1256  carbamoyl phosphate synthase small subunit  36.24 
 
 		 365 aa  224  2e-57  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_3714  carbamoyl phosphate synthase small subunit  36.24 
 
 		 365 aa  222  7e-57  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.971369  n/a   
 
 
-
 
NC_009674  Bcer98_2536  carbamoyl phosphate synthase small subunit  35.41 
 
 		 373 aa  220  1.9999999999999999e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0261621  n/a   
 
 
-
 
NC_012793  GWCH70_1046  carbamoyl phosphate synthase small subunit  33.99 
 
 		 364 aa  219  3.9999999999999997e-56  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_004116  SAG1043  carbamoyl phosphate synthase small subunit  33.14 
 
 		 358 aa  218  8.999999999999998e-56  Streptococcus agalactiae 2603V/R  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_1088  carbamoyl phosphate synthase small subunit  33.62 
 
 		 362 aa  215  9.999999999999999e-55  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_1916  carbamoyl phosphate synthase small subunit  34.08 
 
 		 364 aa  214  1.9999999999999998e-54  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009513  Lreu_0930  carbamoyl phosphate synthase small subunit  35.98 
 
 		 361 aa  213  3.9999999999999995e-54  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_0086  carbamoyl phosphate synthase small subunit  34.37 
 
 		 362 aa  209  4e-53  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000481793  n/a   
 
 
-
 
NC_002976  SERP0768  carbamoyl phosphate synthase small subunit  32.29 
 
 		 366 aa  206  3e-52  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_014150  Bmur_2483  carbamoyl-phosphate synthase, small subunit  33.99 
 
 		 359 aa  202  8e-51  Brachyspira murdochii DSM 12563  Bacteria  hitchhiker  0.0000863462  n/a   
 
 
-
 
NC_009487  SaurJH9_1261  carbamoyl phosphate synthase small subunit  32.77 
 
 		 366 aa  200  3e-50  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_1286  carbamoyl phosphate synthase small subunit  32.77 
 
 		 366 aa  200  3e-50  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.510283  n/a   
 
 
-
 
NC_008531  LEUM_1208  carbamoyl-phosphate synthase small subunit  32.95 
 
 		 361 aa  195  1e-48  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.0000951644  n/a   
 
 
-
 
NC_012034  Athe_1540  carbamoyl-phosphate synthase, small subunit  33.81 
 
 		 356 aa  192  5e-48  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_0950  carbamoyl-phosphate synthase small subunit  34.26 
 
 		 357 aa  192  8e-48  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008528  OEOE_0260  carbamoyl-phosphate synthase small subunit  32.01 
 
 		 363 aa  191  2e-47  Oenococcus oeni PSU-1  Bacteria  normal  0.734432  n/a   
 
 
-
 
NC_009253  Dred_1683  carbamoyl-phosphate synthase, small subunit  30.7 
 
 		 359 aa  189  5e-47  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000104913  n/a   
 
 
-
 
NC_013385  Adeg_0372  carbamoyl-phosphate synthase, small subunit  32.68 
 
 		 359 aa  187  2e-46  Ammonifex degensii KC4  Bacteria  normal  0.386907  n/a   
 
 
-
 
NC_007644  Moth_0881  carbamoyl-phosphate synthase small subunit  29.97 
 
 		 361 aa  187  3e-46  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_2913  carbamoyl-phosphate synthase, small subunit  32.77 
 
 		 351 aa  186  5e-46  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_2898  carbamoyl phosphate synthase small subunit  32.09 
 
 		 349 aa  186  5e-46  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2445  carbamoyl-phosphate synthase, small subunit  31.14 
 
 		 399 aa  186  6e-46  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_0615  carbamoyl-phosphate synthase, small subunit  30.81 
 
 		 360 aa  185  1.0000000000000001e-45  Clostridium cellulolyticum H10  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_2577  carbamoyl phosphate synthase small subunit  31.81 
 
 		 349 aa  185  1.0000000000000001e-45  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0661  carbamoyl phosphate synthase small subunit  32.95 
 
 		 356 aa  184  3e-45  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_2194  carbamoyl-phosphate synthase small subunit  30.35 
 
 		 373 aa  178  2e-43  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_4410  carbamoyl phosphate synthase small subunit  32.35 
 
 		 388 aa  176  5e-43  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.924948 
 
 
-
 
NC_008576  Mmc1_3019  carbamoyl-phosphate synthase small subunit  32.27 
 
 		 377 aa  176  5e-43  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_1307  carbamoyl-phosphate synthase, small subunit  30.31 
 
 		 368 aa  175  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3203  carbamoyl-phosphate synthase, small subunit  31.22 
 
 		 368 aa  175  9.999999999999999e-43  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1942  carbamoyl phosphate synthase small subunit  31.17 
 
 		 389 aa  175  9.999999999999999e-43  Cyanothece sp. PCC 7425  Bacteria  normal  0.230816  normal  0.202912 
 
 
-
 
NC_014248  Aazo_2282  carbamoyl-phosphate synthase small subunit  31.71 
 
 		 385 aa  172  5.999999999999999e-42  'Nostoc azollae' 0708  Bacteria  normal  0.332421  n/a   
 
 
-
 
NC_013525  Tter_1371  carbamoyl-phosphate synthase, small subunit  29.09 
 
 		 368 aa  170  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_2122  carbamoyl phosphate synthase small subunit  30.14 
 
 		 391 aa  169  5e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.618886 
 
 
-
 
NC_008553  Mthe_1255  carbamoyl phosphate synthase small subunit  31.76 
 
 		 361 aa  169  5e-41  Methanosaeta thermophila PT  Archaea  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_1011  carbamoyl phosphate synthase small subunit  31.02 
 
 		 364 aa  169  6e-41  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009635  Maeo_0466  carbamoyl phosphate synthase small subunit  31.71 
 
 		 357 aa  169  9e-41  Methanococcus aeolicus Nankai-3  Archaea  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2643  carbamoyl-phosphate synthase, small subunit  30.81 
 
 		 374 aa  168  1e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009091  P9301_09071  carbamoyl phosphate synthase small subunit  32.16 
 
 		 379 aa  168  1e-40  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  1  n/a   
 
 
-
 
NC_007577  PMT9312_0848  carbamoyl phosphate synthase small subunit  31.18 
 
 		 379 aa  168  1e-40  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1201  carbamoyl phosphate synthase small subunit  31.56 
 
 		 364 aa  167  2e-40  Dehalococcoides ethenogenes 195  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_984  carbamoyl-phosphate synthase, small subunit  31.3 
 
 		 364 aa  167  2e-40  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1867  carbamoyl-phosphate synthase small subunit  30.36 
 
 		 354 aa  167  2e-40  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_008816  A9601_09091  carbamoyl phosphate synthase small subunit  31.99 
 
 		 379 aa  167  2.9999999999999998e-40  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.347132  n/a   
 
 
-
 
NC_008312  Tery_2310  carbamoyl phosphate synthase small subunit  29.89 
 
 		 384 aa  167  2.9999999999999998e-40  Trichodesmium erythraeum IMS101  Bacteria  normal  1  normal  0.162276 
 
 
-
 
NC_009712  Mboo_0833  carbamoyl-phosphate synthase, small subunit  31.83 
 
 		 354 aa  166  5e-40  Candidatus Methanoregula boonei 6A8  Archaea  normal  1  normal  0.332625 
 
 
-
 
NC_011126  HY04AAS1_0951  carbamoyl-phosphate synthase, small subunit  31.39 
 
 		 352 aa  166  5.9999999999999996e-40  Hydrogenobaculum sp. Y04AAS1  Bacteria  hitchhiker  0.00000000113034  n/a   
 
 
-
 
NC_013216  Dtox_2353  carbamoyl-phosphate synthase, small subunit  31.59 
 
 		 358 aa  165  1.0000000000000001e-39  Desulfotomaculum acetoxidans DSM 771  Bacteria  decreased coverage  0.00528586  normal  1 
 
 
-
 
NC_011729  PCC7424_3196  carbamoyl phosphate synthase small subunit  30.16 
 
 		 379 aa  164  2.0000000000000002e-39  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.0368063 
 
 
-
 
NC_008817  P9515_10341  carbamoyl phosphate synthase small subunit  32.26 
 
 		 379 aa  164  2.0000000000000002e-39  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_02880  carbamoyl-phosphate synthase, small subunit  29.69 
 
 		 364 aa  163  3e-39  Halothermothrix orenii H 168  Bacteria  normal  0.422195  n/a   
 
 
-
 
NC_013946  Mrub_2703  carbamoyl-phosphate synthase small subunit  29.4 
 
 		 388 aa  163  5.0000000000000005e-39  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.614253 
 
 
-
 
NC_009954  Cmaq_1295  carbamoyl phosphate synthase small subunit  29.25 
 
 		 359 aa  163  5.0000000000000005e-39  Caldivirga maquilingensis IC-167  Archaea  normal  1  normal  0.0622694 
 
 
-
 
NC_013165  Shel_13220  carbamoyl-phosphate synthase small subunit  30 
 
 		 467 aa  162  7e-39  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.363669  normal  0.801105 
 
 
-
 
NC_014212  Mesil_2356  carbamoyl-phosphate synthase, small subunit  29.35 
 
 		 388 aa  162  7e-39  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011832  Mpal_2318  carbamoyl-phosphate synthase, small subunit  31.92 
 
 		 351 aa  162  8.000000000000001e-39  Methanosphaerula palustris E1-9c  Archaea  normal  1  normal  1 
 
 
-
 
NC_009051  Memar_0989  carbamoyl-phosphate synthase, small subunit  31.87 
 
 		 351 aa  161  2e-38  Methanoculleus marisnigri JR1  Archaea  normal  0.233008  n/a   
 
 
-
 
NC_010085  Nmar_1086  carbamoyl-phosphate synthase small subunit  28.3 
 
 		 384 aa  160  3e-38  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  1 
 
 
-
 
NC_007651  BTH_I2783  carbamoyl phosphate synthase small subunit  30.19 
 
 		 381 aa  160  3e-38  Burkholderia thailandensis E264  Bacteria  normal  0.259596  n/a   
 
 
-
 
NC_011206  Lferr_0790  carbamoyl-phosphate synthase, small subunit  29.65 
 
 		 380 aa  160  3e-38  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011761  AFE_0640  carbamoyl-phosphate synthase, small subunit  29.65 
 
 		 380 aa  160  3e-38  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_1475  carbamoyl phosphate synthase small subunit  30.08 
 
 		 381 aa  159  5e-38  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_2060  carbamoyl phosphate synthase small subunit  28.42 
 
 		 394 aa  159  5e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.745912 
 
 
-
 
NC_013161  Cyan8802_0390  carbamoyl phosphate synthase small subunit  29.16 
 
 		 380 aa  159  6e-38  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011726  PCC8801_0381  carbamoyl phosphate synthase small subunit  29.16 
 
 		 380 aa  159  6e-38  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009076  BURPS1106A_1505  carbamoyl phosphate synthase small subunit  30.08 
 
 		 381 aa  159  8e-38  Burkholderia pseudomallei 1106a  Bacteria  normal  0.188244  n/a   
 
 
-
 
NC_010424  Daud_1303  carbamoyl-phosphate synthase, small subunit  30.34 
 
 		 359 aa  158  1e-37  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0780078  n/a   
 
 
-
 
NC_006348  BMA0770  carbamoyl phosphate synthase small subunit  29.81 
 
 		 381 aa  157  2e-37  Burkholderia mallei ATCC 23344  Bacteria  normal  0.76287  n/a   
 
 
-
 
NC_007355  Mbar_A2375  carbamoyl phosphate synthase small subunit  29.92 
 
 		 369 aa  157  2e-37  Methanosarcina barkeri str. Fusaro  Archaea  normal  0.643002  normal  0.386129 
 
 
-
 
NC_007512  Plut_0156  carbamoyl phosphate synthase small subunit  30 
 
 		 369 aa  157  2e-37  Chlorobium luteolum DSM 273  Bacteria  normal  0.983052  normal  0.416855 
 
 
-
 
NC_008836  BMA10229_A0587  carbamoyl phosphate synthase small subunit  29.81 
 
 		 381 aa  157  2e-37  Burkholderia mallei NCTC 10229  Bacteria  normal  0.368687  n/a   
 
 
-
 
NC_009080  BMA10247_0564  carbamoyl phosphate synthase small subunit  29.81 
 
 		 381 aa  157  2e-37  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1281  carbamoyl phosphate synthase small subunit  29.81 
 
 		 381 aa  157  2e-37  Burkholderia mallei SAVP1  Bacteria  normal  0.697849  n/a   
 
 
-
 
NC_007434  BURPS1710b_1608  carbamoyl phosphate synthase small subunit  29.81 
 
 		 381 aa  157  3e-37  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3359  carbamoyl-phosphate synthase, small subunit  29.3 
 
 		 386 aa  157  3e-37  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.663891  normal  1 
 
 
-
 
NC_010003  Pmob_1699  carbamoyl phosphate synthase small subunit  29.1 
 
 		 347 aa  156  5.0000000000000005e-37  Petrotoga mobilis SJ95  Bacteria  normal  0.213064  n/a   
 
 
-
 
NC_011661  Dtur_1783  carbamoyl-phosphate synthase, small subunit  30 
 
 		 358 aa  156  5.0000000000000005e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1613  carbamoyl phosphate synthase small subunit  28.11 
 
 		 376 aa  156  6e-37  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0266912  n/a   
 
 
-
 
NC_011004  Rpal_1470  carbamoyl phosphate synthase small subunit  28.69 
 
 		 397 aa  156  6e-37  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4142  carbamoyl phosphate synthase small subunit  29.22 
 
 		 397 aa  155  7e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.164526  normal  1 
 
 
-
 
NC_009370  OSTLU_28074  Carbamoyl-phosphate synthase S chain  27.52 
 
 		 415 aa  155  8e-37  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  1  normal  0.210414 
 
 
-
 
NC_009523  RoseRS_4055  carbamoyl-phosphate synthase, small subunit  28.84 
 
 		 386 aa  155  1e-36  Roseiflexus sp. RS-1  Bacteria  normal  0.103191  normal  1 
 
 
-
 
NC_013162  Coch_0275  carbamoyl phosphate synthase small subunit  29.86 
 
 		 366 aa  155  1e-36  Capnocytophaga ochracea DSM 7271  Bacteria  hitchhiker  0.000180913  n/a   
 
 
-
 
NC_009511  Swit_0435  carbamoyl phosphate synthase small subunit  29.84 
 
 		 392 aa  155  1e-36  Sphingomonas wittichii RW1  Bacteria  normal  0.29183  normal  1 
 
 
-
 
NC_014148  Plim_2032  carbamoyl-phosphate synthase, small subunit  27.84 
 
 		 383 aa  155  1e-36  Planctomyces limnophilus DSM 3776  Bacteria  unclonable  0.000000277554  n/a   
 
 
-
 
NC_009135  MmarC5_1820  carbamoyl phosphate synthase small subunit  29.84 
 
 		 366 aa  154  2e-36  Methanococcus maripaludis C5  Archaea  normal  1  n/a   
 
 
-
 
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