| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0989 |
|---|
| Symbol | |
|---|
| ID | 4846145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 972641 |
|---|
| End bp | 973696 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115676 |
|---|
| Product | carbamoyl-phosphate synthase, small subunit |
|---|
| Protein accession | YP_001046904 |
|---|
| Protein GI | 126178939 |
|---|
| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
|---|
| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.233008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGG TTCTGGGTCT TGAAGACGGA ACATTTGTTG TAGGGGATGG TTTTGGCGTT
GAGGGGACAT GTTCCGGCGA ACTCGTCTTC ACGACGCAGA TGACCGGTTA CATGGAGGCA
TTGACTGACC CCAGTTATGC CGGGCAACTT TTGATGTTTA CGTATCCCCT CATCGGGAAC
TATGGTGTAG ACCAGCAGAA TTTTGAGAGC CCGAAGGTTC ACGCGCAGGG CTGCGTCGCG
CGTGAGATCG CACGCGTGCC CGCGGCACGA CCCTCGGTTG CAGAATATTT TGAAGAAAAC
GGCCTTTTCG GGATATCGGG CGTCGATACC CGCAGCCTGA CGATAAAGAC CCGGATGGTC
GGCACGCTCA GGGCATCGCT CATCGTCGGC AGCGACGACG GGGACGAGGC GGTCAGGCGC
GCCCGGGCCA TCTCCCCGAT CGGTGACGTC GACCTCATCG GGGATGTCTC CTGCCCTGAG
CCCTACCGGA TCGCCGGTCC CGGAAAGCGG ATCGCCGTCA TCGATCTCGG TGTGAAGCGG
CACATCCTTG AGAGCCTCGG CCACCGGGGC GCGGATATCC ACGTCTTCCC GCACACCGCC
GCACCGGACG AGGTGATGGC GGCAGAGCCC GACGCACTCT TCATCAGCAA CGGTCCCGGC
GACCCGAGGA GGGCGACGCA CGCCATCCGG TGCGTCCGGG ATCTGACCGG CGAGGTGCCG
GTCATCGGGA TCTGCATGGG CATCCAGGTC GCCGCCCTCG CGCTCGGCGC CGAGACCTAC
AAGATGAAGT TCGGACACCG GGGGACGAAC CAGCCGGTCC GTTACAAGGA CGGGAGCATC
TACATCACGA CGCAGAACCA TGGGTTCGCG GTGGACGAAG AGACCCTGCC CGAGGGATGC
GCGGTCTCGT ACCGGAACGT GAACGACGGC TCGGTCGAGG GGTTCGAGAA CCGCGATCTT
GCCGTCACCT GCGTCCAGTT CCACCCGGAG GCGCACGGCG GCCCCCGGGA TACGGAGATG
CACTTCTTTG ACCGCATATA CAGGGAGATT CCATAA
|
|---|
| Protein sequence | MKAVLGLEDG TFVVGDGFGV EGTCSGELVF TTQMTGYMEA LTDPSYAGQL LMFTYPLIGN
YGVDQQNFES PKVHAQGCVA REIARVPAAR PSVAEYFEEN GLFGISGVDT RSLTIKTRMV
GTLRASLIVG SDDGDEAVRR ARAISPIGDV DLIGDVSCPE PYRIAGPGKR IAVIDLGVKR
HILESLGHRG ADIHVFPHTA APDEVMAAEP DALFISNGPG DPRRATHAIR CVRDLTGEVP
VIGICMGIQV AALALGAETY KMKFGHRGTN QPVRYKDGSI YITTQNHGFA VDEETLPEGC
AVSYRNVNDG SVEGFENRDL AVTCVQFHPE AHGGPRDTEM HFFDRIYREI P
|
|---|
| |